Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775479

Identifier: 119775479

GI number: 119775479

Start: 2812580

End: 2812825

Strand: Reverse

Name: 119775479

Synonym: Sama_2344

Alternate gene names: NA

Gene position: 2812825-2812580 (Counterclockwise)

Preceding gene: 119775481

Following gene: 119775476

Centisome position: 65.32

GC content: 49.19

Gene sequence:

>246_bases
ATGCTGGGAGAAAACCACCTTCTTTCCAATGAGTTCCCCGATTACAGTGAGCTTATCCAAAGTCTTAAGTCCAGTGACAG
CGAATTCAGTGCCAAGGCCAGACGCTATCACGAGCTGGACCATAAGATCCGTGGTCTGGAGGTCAATAAAGTGCCCACCA
CAGATGAACACTTCTCAGCCCTCAAGCTCGAGCGCGCCGAGTTGAAAGATAAAATTTATCATACCCTCAAGGCTCACACA
GGCTGA

Upstream 100 bases:

>100_bases
TGTACGATTTTTGTGCTGTTATCTCATTTGGGCCCGGAGGGCCAAACCAAGTGGACAGCATATTGAACCACACTTTTCAT
CCACCCATATGGAGGTCATC

Downstream 100 bases:

>100_bases
GTCGCGAGTTGAGCCTGCGCGCTTCTTTGCATCAGCAGGCGATACATCACAGGTACCCAAACCAACGACAACAGGGTTGT
CAGCACGGTTCCTCCGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MLGENHLLSNEFPDYSELIQSLKSSDSEFSAKARRYHELDHKIRGLEVNKVPTTDEHFSALKLERAELKDKIYHTLKAHT
G

Sequences:

>Translated_81_residues
MLGENHLLSNEFPDYSELIQSLKSSDSEFSAKARRYHELDHKIRGLEVNKVPTTDEHFSALKLERAELKDKIYHTLKAHT
G
>Mature_81_residues
MLGENHLLSNEFPDYSELIQSLKSSDSEFSAKARRYHELDHKIRGLEVNKVPTTDEHFSALKLERAELKDKIYHTLKAHT
G

Specific function: Unknown

COG id: COG2841

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9366; Mature: 9366

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGENHLLSNEFPDYSELIQSLKSSDSEFSAKARRYHELDHKIRGLEVNKVPTTDEHFSA
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
LKLERAELKDKIYHTLKAHTG
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLGENHLLSNEFPDYSELIQSLKSSDSEFSAKARRYHELDHKIRGLEVNKVPTTDEHFSA
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
LKLERAELKDKIYHTLKAHTG
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA