| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is fliG [H]
Identifier: 119775431
GI number: 119775431
Start: 2760988
End: 2762025
Strand: Reverse
Name: fliG [H]
Synonym: Sama_2296
Alternate gene names: 119775431
Gene position: 2762025-2760988 (Counterclockwise)
Preceding gene: 119775432
Following gene: 119775430
Centisome position: 64.14
GC content: 53.28
Gene sequence:
>1038_bases ATGGCTGAAAATAAAGAAAAATCCGAATCCGGTTTCAAAGTCAGCAATTTAAGCGGCGTTGAAAAAACGGCCATCCTGCT GCTGAGTCTGAGTGAGGCCGACGCGGCCTCTATCCTCAAGCACCTGGAGCCCAAGCAGGTGCAAAAAGTGGGTATGGCCA TGGCCGCACTGGAAGACTTTGGTCAGGAAAAAGTCATCGCGGTACACAAGCAATTTCTGGATGACATTCAGAAATTCTCC TCCATCGGCTTTAACAGCGAAGAATTTGTCCGTAAGGCGCTGACGGCGGCCTTGGGTGAAGACAAGGCTGGCAACCTGAT TGAACAAATCATCATGGGCAGCGGTGCCAAGGGCCTGGATTCACTCAAGTGGATGGACGCCCGTCAGGTAGCCACCATTA TCCAGAACGAACACCCGCAAATTCAAACCATCGTGCTCTCCTATCTCGAGCCGGATCAGGCTGCTGAGATTTTCTCTCAG TTCCCGGAAAACACCCGTCTTGACCTCTTGATGCGGATTGCCAATCTTGAGGAAGTACAGCCTGCGGCCCTGCAGGAACT GAACGATATCATGGAGAAGCAATTTGCCGGTCAGGGTGGTGCTCAGGCGGCCAAGATGGGTGGCCTGAAGGCGGCCGCCA ACATCATGAACTACCTGGATACCGCCATCGAAAGCCAGCTCATGGAAACCATGCGCGAAACCGACGAAGAAATGGCGCAG CAAATTCAGGATCTCATGTTTGTATTCGAAAACCTCATCGATGTGGACGACCGTGGTATTCAAACCTTGCTGCGTGAAGT GCAGCAGGATGTGCTGATGAAGGCCCTCAAGGGCGCCGACGAGCCGCTCAAAGACAAGATCCTCGGCAATATGTCCAAGC GCGCGGCAGAGCTGCTGCGTGATGATCTCGAAGCCATGGGCCCAATCCGTATCAGTGAAGTGGAATTGGCCCAGAAGGAA ATTCTGTCCATTGCAAGACGCCTGTCCGATGCCGGTGAAATCATGCTCGGTGGTGGCGGCGGTGAAGAGTTCATCTGA
Upstream 100 bases:
>100_bases CTGCACAAAGATGATGATATGATTAAGGCTATCCGCGCTCTGGTTGCCAACGAACCTGAGCTTTCCACTCAAGTCGTGAA AAATTGGTTGCAACAGGACA
Downstream 100 bases:
>100_bases TGACTGACAGCAAACGCCCTAAAAACCTATTGCGCGGTGAGGAGCAGGATGAATTCGCCCATTGGCGATTACCTGACATG TCCTCTGCGCGGGAAGAGGA
Product: flagellar motor switch protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MAENKEKSESGFKVSNLSGVEKTAILLLSLSEADAASILKHLEPKQVQKVGMAMAALEDFGQEKVIAVHKQFLDDIQKFS SIGFNSEEFVRKALTAALGEDKAGNLIEQIIMGSGAKGLDSLKWMDARQVATIIQNEHPQIQTIVLSYLEPDQAAEIFSQ FPENTRLDLLMRIANLEEVQPAALQELNDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTAIESQLMETMRETDEEMAQ QIQDLMFVFENLIDVDDRGIQTLLREVQQDVLMKALKGADEPLKDKILGNMSKRAAELLRDDLEAMGPIRISEVELAQKE ILSIARRLSDAGEIMLGGGGGEEFI
Sequences:
>Translated_345_residues MAENKEKSESGFKVSNLSGVEKTAILLLSLSEADAASILKHLEPKQVQKVGMAMAALEDFGQEKVIAVHKQFLDDIQKFS SIGFNSEEFVRKALTAALGEDKAGNLIEQIIMGSGAKGLDSLKWMDARQVATIIQNEHPQIQTIVLSYLEPDQAAEIFSQ FPENTRLDLLMRIANLEEVQPAALQELNDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTAIESQLMETMRETDEEMAQ QIQDLMFVFENLIDVDDRGIQTLLREVQQDVLMKALKGADEPLKDKILGNMSKRAAELLRDDLEAMGPIRISEVELAQKE ILSIARRLSDAGEIMLGGGGGEEFI >Mature_344_residues AENKEKSESGFKVSNLSGVEKTAILLLSLSEADAASILKHLEPKQVQKVGMAMAALEDFGQEKVIAVHKQFLDDIQKFSS IGFNSEEFVRKALTAALGEDKAGNLIEQIIMGSGAKGLDSLKWMDARQVATIIQNEHPQIQTIVLSYLEPDQAAEIFSQF PENTRLDLLMRIANLEEVQPAALQELNDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTAIESQLMETMRETDEEMAQQ IQDLMFVFENLIDVDDRGIQTLLREVQQDVLMKALKGADEPLKDKILGNMSKRAAELLRDDLEAMGPIRISEVELAQKEI LSIARRLSDAGEIMLGGGGGEEFI
Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f
COG id: COG1536
COG function: function code N; Flagellar motor switch protein
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliG family [H]
Homologues:
Organism=Escherichia coli, GI1788249, Length=327, Percent_Identity=43.1192660550459, Blast_Score=273, Evalue=2e-74,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000090 - InterPro: IPR023087 - InterPro: IPR011002 [H]
Pfam domain/function: PF01706 FliG_C [H]
EC number: NA
Molecular weight: Translated: 37954; Mature: 37823
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENKEKSESGFKVSNLSGVEKTAILLLSLSEADAASILKHLEPKQVQKVGMAMAALEDF CCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH GQEKVIAVHKQFLDDIQKFSSIGFNSEEFVRKALTAALGEDKAGNLIEQIIMGSGAKGLD CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH SLKWMDARQVATIIQNEHPQIQTIVLSYLEPDQAAEIFSQFPENTRLDLLMRIANLEEVQ HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCC PAALQELNDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTAIESQLMETMRETDEEMAQ HHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIQDLMFVFENLIDVDDRGIQTLLREVQQDVLMKALKGADEPLKDKILGNMSKRAAELLR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH DDLEAMGPIRISEVELAQKEILSIARRLSDAGEIMLGGGGGEEFI HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC >Mature Secondary Structure AENKEKSESGFKVSNLSGVEKTAILLLSLSEADAASILKHLEPKQVQKVGMAMAALEDF CCCCCCCCCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH GQEKVIAVHKQFLDDIQKFSSIGFNSEEFVRKALTAALGEDKAGNLIEQIIMGSGAKGLD CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH SLKWMDARQVATIIQNEHPQIQTIVLSYLEPDQAAEIFSQFPENTRLDLLMRIANLEEVQ HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCC PAALQELNDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTAIESQLMETMRETDEEMAQ HHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIQDLMFVFENLIDVDDRGIQTLLREVQQDVLMKALKGADEPLKDKILGNMSKRAAELLR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH DDLEAMGPIRISEVELAQKEILSIARRLSDAGEIMLGGGGGEEFI HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]