The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is ylxH [H]

Identifier: 119775416

GI number: 119775416

Start: 2746538

End: 2747419

Strand: Reverse

Name: ylxH [H]

Synonym: Sama_2281

Alternate gene names: 119775416

Gene position: 2747419-2746538 (Counterclockwise)

Preceding gene: 119775417

Following gene: 119775415

Centisome position: 63.8

GC content: 52.04

Gene sequence:

>882_bases
ATGACCCGTGATCAAGCAAGCGGTTTACGTATGATGAATCAGCCATATAACGAAAAAGTAAAAGTCATTGCCGTGACAGG
CGGCAAAGGTGGGGTAGGTAAGACCAGCGTTTCCATCAATACGGCTGTGGCTCTGGCAGAAAAGGGCAAACGGGTATTGG
TACTGGATGCCGACCTCGGTTTGGCCAACGTGGACGTGATGTTGGGTCTGCGTGCCGAAAAAAATCTTTCCCATGTATTA
TCCGGGGACGCCGAGCTGGACGACATCATCCTGCGTGGTCCCAAGGGCATTGGCATAGTGCCTGCTACCTCGGGTACTCA
GGCGATGGTCGAGCTGACAGCTGCGCAGCACGCAGGGCTTATCCGGGCCTTCAGCGAAATGCGCACCCAGTTCGACGTGC
TTATTGTGGATACCGCAGCCGGTATCTCCGATATGGTGCTCAGTTTCTCCCGTGCGGCCCAGGATGTGTTGGTTGTAGTA
TGTGATGAGCCTACGTCAATCACAGATGCCTACGCACTCATCAAAATCCTCAGCCGTGAGCACGGTGTGTTCAGGTTCAA
GATTGTGGCAAATATGGTTCGTAGCCTGCGCGAAGGCATGGAACTTTTTGCTAAACTCAGCAAGGTGACTGACCGCTTTC
TCGACGTGGCACTTGAATTGGTTGCAACCATTCCCTTCGATGAAAACTTGCGAAAATCAGTACGTAAGCAAAAATTGATT
GTAGAGGCTTACCCCAAATCACCTGCTGCCATTGCCTACCACGGTCTGGCGAATAAGGTGATGAGCTGGCCTATCCCGCA
GCAACCCGGTGGCCATCTCGAATTTTTCGTAGAGCGTCTGGTACATCGTCCCGATTATCAAGAGGACAGAGCGAGTGAAT
AA

Upstream 100 bases:

>100_bases
TTGGCAAGACAGGCGCTTGATGCCCTGAATGAACCTGAGTATCAGGGCATCGACAACAATATGTGGTCGGAAAGCACGAC
CTTTGCGTTCGAGTAAAGCT

Downstream 100 bases:

>100_bases
AGCCGCGGCGTATACCTCCATGGAGAGTAAAACCTCCATCGTTGAACAGTACGCACCGCTGGTTAAAAGAATCGCGCACC
ATATGTTGGCCAGATTGCCG

Product: cobyrinic acid a,c-diamide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTRDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGLRAEKNLSHVL
SGDAELDDIILRGPKGIGIVPATSGTQAMVELTAAQHAGLIRAFSEMRTQFDVLIVDTAAGISDMVLSFSRAAQDVLVVV
CDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLI
VEAYPKSPAAIAYHGLANKVMSWPIPQQPGGHLEFFVERLVHRPDYQEDRASE

Sequences:

>Translated_293_residues
MTRDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGLRAEKNLSHVL
SGDAELDDIILRGPKGIGIVPATSGTQAMVELTAAQHAGLIRAFSEMRTQFDVLIVDTAAGISDMVLSFSRAAQDVLVVV
CDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLI
VEAYPKSPAAIAYHGLANKVMSWPIPQQPGGHLEFFVERLVHRPDYQEDRASE
>Mature_292_residues
TRDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGLRAEKNLSHVLS
GDAELDDIILRGPKGIGIVPATSGTQAMVELTAAQHAGLIRAFSEMRTQFDVLIVDTAAGISDMVLSFSRAAQDVLVVVC
DEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLIV
EAYPKSPAAIAYHGLANKVMSWPIPQQPGGHLEFFVERLVHRPDYQEDRASE

Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest

COG id: COG0455

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787423, Length=163, Percent_Identity=31.9018404907975, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87082045, Length=276, Percent_Identity=25.3623188405797, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 31924; Mature: 31793

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLG
CCCCHHCCHHHHCCCCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHCCCEEEEEECCCC
LANVDVMLGLRAEKNLSHVLSGDAELDDIILRGPKGIGIVPATSGTQAMVELTAAQHAGL
EECEEEEEECCCCCCHHHHHCCCCCCCHHEEECCCCCEEEECCCCCHHHHHHHHHHHHHH
IRAFSEMRTQFDVLIVDTAAGISDMVLSFSRAAQDVLVVVCDEPTSITDAYALIKILSRE
HHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCC
HGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLI
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEE
VEAYPKSPAAIAYHGLANKVMSWPIPQQPGGHLEFFVERLVHRPDYQEDRASE
EEECCCCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TRDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLG
CCCHHCCHHHHCCCCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHCCCEEEEEECCCC
LANVDVMLGLRAEKNLSHVLSGDAELDDIILRGPKGIGIVPATSGTQAMVELTAAQHAGL
EECEEEEEECCCCCCHHHHHCCCCCCCHHEEECCCCCEEEECCCCCHHHHHHHHHHHHHH
IRAFSEMRTQFDVLIVDTAAGISDMVLSFSRAAQDVLVVVCDEPTSITDAYALIKILSRE
HHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCC
HGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLI
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEE
VEAYPKSPAAIAYHGLANKVMSWPIPQQPGGHLEFFVERLVHRPDYQEDRASE
EEECCCCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7987014; 9384377 [H]