Click here to switch to the map view.

The map label for this gene is galE [H]

Identifier: 119775384

GI number: 119775384

Start: 2712884

End: 2713807

Strand: Reverse

Name: galE [H]

Synonym: Sama_2249

Alternate gene names: 119775384

Gene position: 2713807-2712884 (Counterclockwise)

Preceding gene: 119775385

Following gene: 119775383

Centisome position: 63.02

GC content: 35.28

Gene sequence:

>924_bases
ATGAAAGTTCTGATTACAGGTGGTTCAGGATTTGTCGGAAGGTATTTGCAAGGATATTTTAATTCGGATGAATACGATGT
CGCAATAACTAGCAGGTGTAAATCAAATATTAGTGATTTTCCAGTTTATACGATTCCTGCTATAGACCAACATACTGATT
GGAAACATGCTTTAAAAAACGTTGACGTCGTTGTGCATCTAGCATCTCGAGCACATAGTTCTGACAATCACTCTGAAGCT
GCAAAAGAGGACTTTACTAAGACCAACGTTTTGGGTTTATCTAAACTATTGGATGACTGCATTTTCTTAGGCGTAAAGCG
AATTATTTACTTAAGTAGCATTAAGGCATTAGGAGAATCAACTGACGGTCGCGATGCTTTTTCTGAATCAGATAAATACA
ATCCAGCTGACTACTATGGTATTACGAAAGCTCGTGCAGAGCAGTTGGTAGTAGAAAAATGTAAGCATAGCGGTTTAGAT
TACACTATAATACGTCCTCCTTTAGTTTATGGTAAGTCTGCGAAAGCGAATTTGCAGAGTATTGCAAGAGGGCTCTCATA
TTCTTTGCCATTTCCTTATTTTACCTCTTCTAATAGAAGAAGTTTGATAAGTGTGCACAGCCTCTGTAGATTTATAGTCG
CAGTTGCTAATGACCCAAATACAAATAATCAAATTTATAATGTTGCAGATAATTATGTATTAAGCACTAAAGATATATTT
TCATTGATAAAGTCGTGCTCAAATTCAAAGTCGTTTATTTTTCCTATTCCTAAGTTTATTTTCACGTTTTTGGCTTTTTT
TTGGAGTAAGTTTGGTGATGTCTCTACCAAGTTGTATGGTTCTCTTGAGATAAATAATACTAAAGCAACTAAAGTGATAT
CTTGGAAGCCGCTCGAAAAGCCAGAAAAGAATGATTTTGTTTAA

Upstream 100 bases:

>100_bases
AACCTATCGAAATTGCACATGCAGTTGCATTTTTGTTAGACGATAAGTCAGCTTATATCACAGGAGCGGACATTCCTGTG
AATGGTGGATTGCATTTATC

Downstream 100 bases:

>100_bases
GGTCTTGCTATGTTAAATATTGTTGTAGTTGCTCACCCGGATGACGAAATTTTGGGATTTGGTGCCACAGGTGCAAAGTT
GGCTGCCAAAGGTGAAGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKVLITGGSGFVGRYLQGYFNSDEYDVAITSRCKSNISDFPVYTIPAIDQHTDWKHALKNVDVVVHLASRAHSSDNHSEA
AKEDFTKTNVLGLSKLLDDCIFLGVKRIIYLSSIKALGESTDGRDAFSESDKYNPADYYGITKARAEQLVVEKCKHSGLD
YTIIRPPLVYGKSAKANLQSIARGLSYSLPFPYFTSSNRRSLISVHSLCRFIVAVANDPNTNNQIYNVADNYVLSTKDIF
SLIKSCSNSKSFIFPIPKFIFTFLAFFWSKFGDVSTKLYGSLEINNTKATKVISWKPLEKPEKNDFV

Sequences:

>Translated_307_residues
MKVLITGGSGFVGRYLQGYFNSDEYDVAITSRCKSNISDFPVYTIPAIDQHTDWKHALKNVDVVVHLASRAHSSDNHSEA
AKEDFTKTNVLGLSKLLDDCIFLGVKRIIYLSSIKALGESTDGRDAFSESDKYNPADYYGITKARAEQLVVEKCKHSGLD
YTIIRPPLVYGKSAKANLQSIARGLSYSLPFPYFTSSNRRSLISVHSLCRFIVAVANDPNTNNQIYNVADNYVLSTKDIF
SLIKSCSNSKSFIFPIPKFIFTFLAFFWSKFGDVSTKLYGSLEINNTKATKVISWKPLEKPEKNDFV
>Mature_307_residues
MKVLITGGSGFVGRYLQGYFNSDEYDVAITSRCKSNISDFPVYTIPAIDQHTDWKHALKNVDVVVHLASRAHSSDNHSEA
AKEDFTKTNVLGLSKLLDDCIFLGVKRIIYLSSIKALGESTDGRDAFSESDKYNPADYYGITKARAEQLVVEKCKHSGLD
YTIIRPPLVYGKSAKANLQSIARGLSYSLPFPYFTSSNRRSLISVHSLCRFIVAVANDPNTNNQIYNVADNYVLSTKDIF
SLIKSCSNSKSFIFPIPKFIFTFLAFFWSKFGDVSTKLYGSLEINNTKATKVISWKPLEKPEKNDFV

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 34387; Mature: 34387

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLITGGSGFVGRYLQGYFNSDEYDVAITSRCKSNISDFPVYTIPAIDQHTDWKHALKN
CEEEEECCCCHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEEECCCCCCCCHHHHHCC
VDVVVHLASRAHSSDNHSEAAKEDFTKTNVLGLSKLLDDCIFLGVKRIIYLSSIKALGES
HHHEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TDGRDAFSESDKYNPADYYGITKARAEQLVVEKCKHSGLDYTIIRPPLVYGKSAKANLQS
CCCCHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCHHHHHH
IARGLSYSLPFPYFTSSNRRSLISVHSLCRFIVAVANDPNTNNQIYNVADNYVLSTKDIF
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECHHHHH
SLIKSCSNSKSFIFPIPKFIFTFLAFFWSKFGDVSTKLYGSLEINNTKATKVISWKPLEK
HHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCC
PEKNDFV
CCCCCCC
>Mature Secondary Structure
MKVLITGGSGFVGRYLQGYFNSDEYDVAITSRCKSNISDFPVYTIPAIDQHTDWKHALKN
CEEEEECCCCHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEEECCCCCCCCHHHHHCC
VDVVVHLASRAHSSDNHSEAAKEDFTKTNVLGLSKLLDDCIFLGVKRIIYLSSIKALGES
HHHEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TDGRDAFSESDKYNPADYYGITKARAEQLVVEKCKHSGLDYTIIRPPLVYGKSAKANLQS
CCCCHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCHHHHHH
IARGLSYSLPFPYFTSSNRRSLISVHSLCRFIVAVANDPNTNNQIYNVADNYVLSTKDIF
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECHHHHH
SLIKSCSNSKSFIFPIPKFIFTFLAFFWSKFGDVSTKLYGSLEINNTKATKVISWKPLEK
HHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCC
PEKNDFV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8820651; 10521656 [H]