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The map label for this gene is ycbC [H]

Identifier: 119775365

GI number: 119775365

Start: 2694607

End: 2695344

Strand: Reverse

Name: ycbC [H]

Synonym: Sama_2230

Alternate gene names: 119775365

Gene position: 2695344-2694607 (Counterclockwise)

Preceding gene: 119775366

Following gene: 119775364

Centisome position: 62.59

GC content: 55.56

Gene sequence:

>738_bases
ATGTTTTTACTCAAAAAGCTCCTCTCACTGCTGGTGATGCCCATTCCTTTGCTGGTGTTGGTGTTGCTGCTGGTGCTTTT
GATATGGCGACGACGCGCGCTGGCGCGTTCACTGCTGATGTTATCCATCGCCGCGCTGGTATTTTTGTCGTCCACCTTCG
GCAGCAATTTGATAATCAGCCCACTTGAGCAGCGCTACAGCGCCAACCCAAGGCCCATTTTGGGTGACTGTGTAGTGTCG
GTTCTGGGATCTGAGCATGATGATGCCATCTTCGGCAGCGCAGTACAGCAGTTGTCACCGGTGGCGCTGGCCCGTTTGAC
AGAAGGGCTTAAACAAATGTCACTCGGGCAGGATTGCACCCTCATCGTGAGTGGCTATCGCAGTGACTACAATCGTTTTG
CCCATGCAGACGTGATGAAACAGGCCGCGATGGAGCTTGGTGTACCCGAGGCGCAGATAATTGCCTTGCCCCTTGCCAGG
GACACGCTGGAAGAGGCTCGGCAGATAAAGGCGCTGGGGCTTCAGGGGGCATTAAGACTTGTCACCTCAGCTGCCCATAT
GCCACGGGCCATGGCCATGTTTGCCCACGAGGGAATCACTGCAGACGCGGCCCCCACCGATTTTACTGCGCGCCAATCCA
CCTGGTGGCGACTAAATGCCGACGCCCTGAACAGCGCACAAAAGGCTATCCATGAATATGTTGGCACTCTGTGGTTTGAG
TTGAGGTACGGGGCATGA

Upstream 100 bases:

>100_bases
CCTTGTCTGCTTTCATGCCGGCAAGGCGTTTTTTCAGCTGGCCACAACTTCTCTCCTTGGGTAAGCTCTTGCCTCATCGC
GTTTAAGGCAAGATTTATCC

Downstream 100 bases:

>100_bases
CAGAGCAAAGAAATGGACATTTTTCCATCGTAGCGGCCACCAAGCGAAACGGCATCACCTTAACCGTAATAAGTGCACTG
CTGCTGTGTGTTTCGCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MFLLKKLLSLLVMPIPLLVLVLLLVLLIWRRRALARSLLMLSIAALVFLSSTFGSNLIISPLEQRYSANPRPILGDCVVS
VLGSEHDDAIFGSAVQQLSPVALARLTEGLKQMSLGQDCTLIVSGYRSDYNRFAHADVMKQAAMELGVPEAQIIALPLAR
DTLEEARQIKALGLQGALRLVTSAAHMPRAMAMFAHEGITADAAPTDFTARQSTWWRLNADALNSAQKAIHEYVGTLWFE
LRYGA

Sequences:

>Translated_245_residues
MFLLKKLLSLLVMPIPLLVLVLLLVLLIWRRRALARSLLMLSIAALVFLSSTFGSNLIISPLEQRYSANPRPILGDCVVS
VLGSEHDDAIFGSAVQQLSPVALARLTEGLKQMSLGQDCTLIVSGYRSDYNRFAHADVMKQAAMELGVPEAQIIALPLAR
DTLEEARQIKALGLQGALRLVTSAAHMPRAMAMFAHEGITADAAPTDFTARQSTWWRLNADALNSAQKAIHEYVGTLWFE
LRYGA
>Mature_245_residues
MFLLKKLLSLLVMPIPLLVLVLLLVLLIWRRRALARSLLMLSIAALVFLSSTFGSNLIISPLEQRYSANPRPILGDCVVS
VLGSEHDDAIFGSAVQQLSPVALARLTEGLKQMSLGQDCTLIVSGYRSDYNRFAHADVMKQAAMELGVPEAQIIALPLAR
DTLEEARQIKALGLQGALRLVTSAAHMPRAMAMFAHEGITADAAPTDFTARQSTWWRLNADALNSAQKAIHEYVGTLWFE
LRYGA

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=106, Percent_Identity=39.622641509434, Blast_Score=74, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 26867; Mature: 26867

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLKKLLSLLVMPIPLLVLVLLLVLLIWRRRALARSLLMLSIAALVFLSSTFGSNLIIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC
PLEQRYSANPRPILGDCVVSVLGSEHDDAIFGSAVQQLSPVALARLTEGLKQMSLGQDCT
CHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LIVSGYRSDYNRFAHADVMKQAAMELGVPEAQIIALPLARDTLEEARQIKALGLQGALRL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHH
VTSAAHMPRAMAMFAHEGITADAAPTDFTARQSTWWRLNADALNSAQKAIHEYVGTLWFE
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
LRYGA
EECCC
>Mature Secondary Structure
MFLLKKLLSLLVMPIPLLVLVLLLVLLIWRRRALARSLLMLSIAALVFLSSTFGSNLIIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC
PLEQRYSANPRPILGDCVVSVLGSEHDDAIFGSAVQQLSPVALARLTEGLKQMSLGQDCT
CHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LIVSGYRSDYNRFAHADVMKQAAMELGVPEAQIIALPLARDTLEEARQIKALGLQGALRL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHH
VTSAAHMPRAMAMFAHEGITADAAPTDFTARQSTWWRLNADALNSAQKAIHEYVGTLWFE
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
LRYGA
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]