| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119775318
Identifier: 119775318
GI number: 119775318
Start: 2642017
End: 2642232
Strand: Direct
Name: 119775318
Synonym: Sama_2183
Alternate gene names: NA
Gene position: 2642017-2642232 (Clockwise)
Preceding gene: 119775317
Following gene: 119775319
Centisome position: 61.35
GC content: 48.61
Gene sequence:
>216_bases ATGTCACTTGAACGTTCTATTATGGCTTTTGCCGGCTTTATGGTGCTGCTGTCTTTGGTTCTGACCGCACTGGTCCATCA CAATTTTGTCTGGCTTACTGCTTTTGTCGGCGCTAACCTGTTCCAGAGTGCCTTTACCGGTTTTTGCCCGGCCGCCATGC TGATGAAGAAGCTGGGGGTAAAAACCGAGGCCGAACTTTGTAAGTTAAAACAGTAG
Upstream 100 bases:
>100_bases TCAACCTTGCTGACCTTGGTCGTGATCCCCGTGCTGTACTACAGTTTTATGAGACACGGCCATGAAACCGAATAACATGC CCTACATCAGGAGAAACACT
Downstream 100 bases:
>100_bases CTGTAAATGAAAACAGTCACCAAGGAGACGCTGTGAACCCACTGGCTAAAGTCGGGCAACTTGCCCTGATTGGTCTGATG CTGATACTGACAAGCACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSLERSIMAFAGFMVLLSLVLTALVHHNFVWLTAFVGANLFQSAFTGFCPAAMLMKKLGVKTEAELCKLKQ
Sequences:
>Translated_71_residues MSLERSIMAFAGFMVLLSLVLTALVHHNFVWLTAFVGANLFQSAFTGFCPAAMLMKKLGVKTEAELCKLKQ >Mature_70_residues SLERSIMAFAGFMVLLSLVLTALVHHNFVWLTAFVGANLFQSAFTGFCPAAMLMKKLGVKTEAELCKLKQ
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7824; Mature: 7692
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLERSIMAFAGFMVLLSLVLTALVHHNFVWLTAFVGANLFQSAFTGFCPAAMLMKKLGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC KTEAELCKLKQ CCHHHHHHCCC >Mature Secondary Structure SLERSIMAFAGFMVLLSLVLTALVHHNFVWLTAFVGANLFQSAFTGFCPAAMLMKKLGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC KTEAELCKLKQ CCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA