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The map label for this gene is 119775308

Identifier: 119775308

GI number: 119775308

Start: 2627817

End: 2629922

Strand: Direct

Name: 119775308

Synonym: Sama_2173

Alternate gene names: NA

Gene position: 2627817-2629922 (Clockwise)

Preceding gene: 119775307

Following gene: 119775309

Centisome position: 61.02

GC content: 57.55

Gene sequence:

>2106_bases
ATGATCCACTTTATCCGGCCTGAATGGCTGCTCTTGTTTATCCCGCTGCTGCCTGTGCTGTGGTTTTTAAACCGACGCCA
AAGCGTATCCTCTGCCTGGCAGGGCTATATCGCGCCCCACCTCGCCAGAGTGCTGCTAACCGAGGGCGAAGGGCGCCGTT
CAGGCGTCGGTCTGTGGTGGCTCGGCGTTGCCTGGACTGTAACCACCCTCGCTCTTTCCGGTCCGGCCATCACCAAGGAG
CCCATGCCAGTGTTCTCAGCCGGTGCGGCCAGGGTATTGGTTATGGATATGTCCATTTCCATGTATGCCACCGATTTGCC
ACCGAATCGATTAACTCAGGCCAGATTTCGCGCCATCGACCTGATAAATCAGCTCAGCGACGGTGACACGGCGCTGGTCG
CCTATGCGGGGGAGGCCTTTGTCATCAGCCCACTCACCCGCGATAAGGCCACCCTACTCAATCTGCTGCCCTCACTCAGC
CCCGACATCATGCCGCTGCTGGGCTCATCTCCCGCCGCCGGCATTAGCCTTGCCAGAGATCTGCTGACCCAGGGCGGACA
TCCCGACGGCGACATAGTGCTGATGACTGACGGCCTTGATGCCGTGGACGTGGCAGATGTGAAGCGGTCACTGAAAGGCA
GCCCGTTTCGGTTAACGGTTTATGGTTTTGGTACTGCGCAGGGTGCGCCCATGAAGCTGCCCAATGGCAGTTTCGTGAGA
GGCAATGACGACAATCTGGTGCTGCCCAAGCTGGACGCCGAGCTTTTAGCCGGATTGGCCCAGTCAGAGCGCGGCATTTG
GCAGCCATCAACCCTGGATGGCTCTGATGTCAGTCGCCTCGTTAAGTGGTTATCGCGGGAAGGCGAAGCCACTGATACAG
AGCTCACCGGCGACACCTGGCAGGATTTGGGGCCATATCTCGCCCTGTTGCTGCTGTTGCCTGCCCTGCTGAGTTTTCGC
CGGGGCGTGCTGGCGTCAATGCTGTTGCCGGCGATGCTGGCACTTTCCCTGAGCAGCCAAGAAGCCGAGGCCAGTATCTG
GCAAACCCCGGACCAACAGGCCATGGAGGCATTTCGGCAGAAAGACTTTACCACCGCCGCCAATGAATTCGAGCGGGAAG
ATTGGAAAGCTGCCGCCCATTACCGGGCCGGTGACTATGAAGCGGCGCTGAAGGGCTTTGAGCAAGATAGCAGTGCTGCG
GGTCTTTATAATCAGGGCAATGCCTTGATGCAGCTGGGTCGTTACGATGAAGCGGCGAAGCGCTATCAAAAAGCACTTGA
GCAACAACCGGATATGGAAGATGCCAAGCGCAATGCTGCCCTCGCCAAGGCGCTCCAGGAGATGCAAGAATCTCAGCAAG
AAAAACAAGGTCAGGATGGACAGTCCTCATCTGACGACTCACAGCAGCAAAACTCTCAGTCACAGCAGCAAAACTCGCAG
CAATCTGGCACAGAGCAAGGCCAGGACTCGGAGCAAGGCGCTGAAAACAACAATGGAGATCAGTCGCAAAGCAGCCCACA
GTCAGGAGACGAGGGCTCGCAAAGTGCCCAGGACGGACAAAGCCCCGGCGAATCACAGCAACAACACGAAAGCCAGCAAA
ACGAAAGCCAGCAAAACGAAAGTCAGCAAGGCGATGCCGCGCAGGAGACAACCTCCGCTGACGACGTGGCAAACCAAGGC
AGCTCTGATTCAAAAAGCGAAGACACAAATAACAGCGAGTCAGACAGCGGCAAGGGCGATGGCAATAACGACGCGCCCAT
GAGTGCCGATATCAACGCAGAGCAGCCAAAAGCGCCAGCTCCCAACGGTGAGTCTGCCGTGAGCAGTGGCAGCACTGAGG
CCGATGAGCAAACCAGTCCAGCCGAGCAGGCTGGCAGCCAGACAGTCGCAGAGCTCGCCGAGGGCGAGTCAGAAGCGGAT
GCAGAGCAAGCTCAGGTGGGCGTGATAGATCCCAGCCTGAAAGAATCAGATCTGCCGCCGGAGATGCTGAGGGCGCTAAA
ATCCGTAAACGACGACCCCTCTGTACTGCTTCGCAATAAGATGCAATTGGAATATCAACTTCGCCGCGCCCGCGGTGAAC
ACAGACAGGAAAAAGAAAAGTGGTAA

Upstream 100 bases:

>100_bases
AGCAGGAGCTGTTTTTCTATCCCCTTGCCCTCGCCTTATTCTTGAGCCTATTGGCGGCGCTGCGGGAAGGCGGTCTGTTT
GCTTCCGGGAGGAATGCGCC

Downstream 100 bases:

>100_bases
GGAATCTGATACTGGGACTCACCCTGTTTTTTTTCACCCTCCCGGGCTGGGCACTGAACCGGATAGAGGCCACCGTGGAT
AAAAATCCGGTGGGCCGGGA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Von Willebrand Factor Type A; TPR Domain-Containing Protein; BatB Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Von Willebrand Factor Type A Domain-Containing Protein; Aerotolerance-Related Membrane Protein; Transmembrane Protein; TPR Repeat; TPR Domain Protein In Aerotolerance Operon; BatA Protein; Von Willebrand Factor Type A Domain Protein; Tetratricopeptide Protein; Tetratricopeptide Repeat Family; Unknwon Proteins; Transmembrane TPR Repeat-Containing Protein; Ssl1 Domain Protein; Batb Protein; BatB/BatC Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 701; Mature: 701

Protein sequence:

>701_residues
MIHFIRPEWLLLFIPLLPVLWFLNRRQSVSSAWQGYIAPHLARVLLTEGEGRRSGVGLWWLGVAWTVTTLALSGPAITKE
PMPVFSAGAARVLVMDMSISMYATDLPPNRLTQARFRAIDLINQLSDGDTALVAYAGEAFVISPLTRDKATLLNLLPSLS
PDIMPLLGSSPAAGISLARDLLTQGGHPDGDIVLMTDGLDAVDVADVKRSLKGSPFRLTVYGFGTAQGAPMKLPNGSFVR
GNDDNLVLPKLDAELLAGLAQSERGIWQPSTLDGSDVSRLVKWLSREGEATDTELTGDTWQDLGPYLALLLLLPALLSFR
RGVLASMLLPAMLALSLSSQEAEASIWQTPDQQAMEAFRQKDFTTAANEFEREDWKAAAHYRAGDYEAALKGFEQDSSAA
GLYNQGNALMQLGRYDEAAKRYQKALEQQPDMEDAKRNAALAKALQEMQESQQEKQGQDGQSSSDDSQQQNSQSQQQNSQ
QSGTEQGQDSEQGAENNNGDQSQSSPQSGDEGSQSAQDGQSPGESQQQHESQQNESQQNESQQGDAAQETTSADDVANQG
SSDSKSEDTNNSESDSGKGDGNNDAPMSADINAEQPKAPAPNGESAVSSGSTEADEQTSPAEQAGSQTVAELAEGESEAD
AEQAQVGVIDPSLKESDLPPEMLRALKSVNDDPSVLLRNKMQLEYQLRRARGEHRQEKEKW

Sequences:

>Translated_701_residues
MIHFIRPEWLLLFIPLLPVLWFLNRRQSVSSAWQGYIAPHLARVLLTEGEGRRSGVGLWWLGVAWTVTTLALSGPAITKE
PMPVFSAGAARVLVMDMSISMYATDLPPNRLTQARFRAIDLINQLSDGDTALVAYAGEAFVISPLTRDKATLLNLLPSLS
PDIMPLLGSSPAAGISLARDLLTQGGHPDGDIVLMTDGLDAVDVADVKRSLKGSPFRLTVYGFGTAQGAPMKLPNGSFVR
GNDDNLVLPKLDAELLAGLAQSERGIWQPSTLDGSDVSRLVKWLSREGEATDTELTGDTWQDLGPYLALLLLLPALLSFR
RGVLASMLLPAMLALSLSSQEAEASIWQTPDQQAMEAFRQKDFTTAANEFEREDWKAAAHYRAGDYEAALKGFEQDSSAA
GLYNQGNALMQLGRYDEAAKRYQKALEQQPDMEDAKRNAALAKALQEMQESQQEKQGQDGQSSSDDSQQQNSQSQQQNSQ
QSGTEQGQDSEQGAENNNGDQSQSSPQSGDEGSQSAQDGQSPGESQQQHESQQNESQQNESQQGDAAQETTSADDVANQG
SSDSKSEDTNNSESDSGKGDGNNDAPMSADINAEQPKAPAPNGESAVSSGSTEADEQTSPAEQAGSQTVAELAEGESEAD
AEQAQVGVIDPSLKESDLPPEMLRALKSVNDDPSVLLRNKMQLEYQLRRARGEHRQEKEKW
>Mature_701_residues
MIHFIRPEWLLLFIPLLPVLWFLNRRQSVSSAWQGYIAPHLARVLLTEGEGRRSGVGLWWLGVAWTVTTLALSGPAITKE
PMPVFSAGAARVLVMDMSISMYATDLPPNRLTQARFRAIDLINQLSDGDTALVAYAGEAFVISPLTRDKATLLNLLPSLS
PDIMPLLGSSPAAGISLARDLLTQGGHPDGDIVLMTDGLDAVDVADVKRSLKGSPFRLTVYGFGTAQGAPMKLPNGSFVR
GNDDNLVLPKLDAELLAGLAQSERGIWQPSTLDGSDVSRLVKWLSREGEATDTELTGDTWQDLGPYLALLLLLPALLSFR
RGVLASMLLPAMLALSLSSQEAEASIWQTPDQQAMEAFRQKDFTTAANEFEREDWKAAAHYRAGDYEAALKGFEQDSSAA
GLYNQGNALMQLGRYDEAAKRYQKALEQQPDMEDAKRNAALAKALQEMQESQQEKQGQDGQSSSDDSQQQNSQSQQQNSQ
QSGTEQGQDSEQGAENNNGDQSQSSPQSGDEGSQSAQDGQSPGESQQQHESQQNESQQNESQQGDAAQETTSADDVANQG
SSDSKSEDTNNSESDSGKGDGNNDAPMSADINAEQPKAPAPNGESAVSSGSTEADEQTSPAEQAGSQTVAELAEGESEAD
AEQAQVGVIDPSLKESDLPPEMLRALKSVNDDPSVLLRNKMQLEYQLRRARGEHRQEKEKW

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75766; Mature: 75766

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHFIRPEWLLLFIPLLPVLWFLNRRQSVSSAWQGYIAPHLARVLLTEGEGRRSGVGLWW
CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LGVAWTVTTLALSGPAITKEPMPVFSAGAARVLVMDMSISMYATDLPPNRLTQARFRAID
HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHH
LINQLSDGDTALVAYAGEAFVISPLTRDKATLLNLLPSLSPDIMPLLGSSPAAGISLARD
HHHHCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHH
LLTQGGHPDGDIVLMTDGLDAVDVADVKRSLKGSPFRLTVYGFGTAQGAPMKLPNGSFVR
HHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEECCCCCEEE
GNDDNLVLPKLDAELLAGLAQSERGIWQPSTLDGSDVSRLVKWLSREGEATDTELTGDTW
CCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH
QDLGPYLALLLLLPALLSFRRGVLASMLLPAMLALSLSSQEAEASIWQTPDQQAMEAFRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHH
KDFTTAANEFEREDWKAAAHYRAGDYEAALKGFEQDSSAAGLYNQGNALMQLGRYDEAAK
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHCHHHHHH
RYQKALEQQPDMEDAKRNAALAKALQEMQESQQEKQGQDGQSSSDDSQQQNSQSQQQNSQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QSGTEQGQDSEQGAENNNGDQSQSSPQSGDEGSQSAQDGQSPGESQQQHESQQNESQQNE
HCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH
SQQGDAAQETTSADDVANQGSSDSKSEDTNNSESDSGKGDGNNDAPMSADINAEQPKAPA
HHCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PNGESAVSSGSTEADEQTSPAEQAGSQTVAELAEGESEADAEQAQVGVIDPSLKESDLPP
CCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCEECCCCCCCCCCCCCH
EMLRALKSVNDDPSVLLRNKMQLEYQLRRARGEHRQEKEKW
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIHFIRPEWLLLFIPLLPVLWFLNRRQSVSSAWQGYIAPHLARVLLTEGEGRRSGVGLWW
CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LGVAWTVTTLALSGPAITKEPMPVFSAGAARVLVMDMSISMYATDLPPNRLTQARFRAID
HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHH
LINQLSDGDTALVAYAGEAFVISPLTRDKATLLNLLPSLSPDIMPLLGSSPAAGISLARD
HHHHCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHH
LLTQGGHPDGDIVLMTDGLDAVDVADVKRSLKGSPFRLTVYGFGTAQGAPMKLPNGSFVR
HHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEECCCCCEEE
GNDDNLVLPKLDAELLAGLAQSERGIWQPSTLDGSDVSRLVKWLSREGEATDTELTGDTW
CCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH
QDLGPYLALLLLLPALLSFRRGVLASMLLPAMLALSLSSQEAEASIWQTPDQQAMEAFRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHH
KDFTTAANEFEREDWKAAAHYRAGDYEAALKGFEQDSSAAGLYNQGNALMQLGRYDEAAK
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHCHHHHHH
RYQKALEQQPDMEDAKRNAALAKALQEMQESQQEKQGQDGQSSSDDSQQQNSQSQQQNSQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QSGTEQGQDSEQGAENNNGDQSQSSPQSGDEGSQSAQDGQSPGESQQQHESQQNESQQNE
HCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH
SQQGDAAQETTSADDVANQGSSDSKSEDTNNSESDSGKGDGNNDAPMSADINAEQPKAPA
HHCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PNGESAVSSGSTEADEQTSPAEQAGSQTVAELAEGESEADAEQAQVGVIDPSLKESDLPP
CCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCEECCCCCCCCCCCCCH
EMLRALKSVNDDPSVLLRNKMQLEYQLRRARGEHRQEKEKW
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA