| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119775292
Identifier: 119775292
GI number: 119775292
Start: 2606354
End: 2607478
Strand: Reverse
Name: 119775292
Synonym: Sama_2157
Alternate gene names: NA
Gene position: 2607478-2606354 (Counterclockwise)
Preceding gene: 119775293
Following gene: 119775291
Centisome position: 60.55
GC content: 55.82
Gene sequence:
>1125_bases ATGGCCAATAAGTTCAGATTGGGCCTGATTATTAACCCGCTGGCTGGTCTTGGCGGCAGCGTAGCCCTCAAAGGCAGTGA TGGTGTGGCGGAAGAGGCTCTGGCCCTTGGTGCTGAGCCCAAAGCGCATTTGCGGATGCGCTCAGCGCTGGAGCAGGTAC TGCCATATAAAGAACGTTTTATCGTCCATACCGCAGCGGGGAGCATGGGTGAAGACCTTTGCCGCGAGCTTGGCTTCGAG GTGCAGGTGTATTATCAACCTCATAGTGAGCACACCACCGCCGAGGATACTCGTGAGGCAGTAAAAGCCTTGGCCAGTGA GACCCTGGATTTGCTGCTGTTTGCAGGCGGAGATGGCACAGCCCGGGATGTGTTCGCCGAAGTTGATGAGCGGCAGGTGG TGCTCGGGGTGCCGGCCGGGGTGAAAATTCACTCAGGGGTGTATGGCATTACCCCAAAAGCCTCCGGGCTGGTGCTGAAG ATGCTGATGCAGGGCGAACTGGTGTCGCTTATGAGTGCCGATGTCATGGATATCGATGAAGAGGCGTTTCGTCAGGGCAG GGTACGTGCCCGCCGTTTTGGCGAGATGCTGGTACCGGCCGAGCCCCGTTATGTGCAGGCAGTAAAAATGGGCGGAAAAG AAGTCGATGAGTTGGTGCTCAGCGACATTGCTGCCGAAATCGTGTCTGAAATGGACGACAGCCTTTACATCATGGGTTCT GGCAGTACAGTGGCTGCCGTGATGGAGGAACTTGGGCTCGAAAACACCCTGCTCGGGGTGGACCTGGTTCAGGACCGCGG GCTTATCGCCTCGGATCTGACTGCTCAGCAACTGCTTGAGCAAACGGAAAATCAGCCACTTAAGCTGGTTATCACCCTCA TTGGCGGCCAGGGACATATCCTTGGCCGGGGTAATCAGCAGTTGTCACCGGCGCTTATTCGCCGCGTGGGCAAAGAAAAT ATTTTGATTGTTGCCACCAAAACCAAGCTTAAAGCCCTTGAAGGGCGACCGCTTATCGTGGATAGTGGCGACCCAGAGCT GGACCAGGCCTTGATTGGCTATTATCGGGTAGTGACAGGCTACCGCGACTATGTGATGTATCAGGTCGCAAATCCGACGG AGTAA
Upstream 100 bases:
>100_bases CGCTGCTTGTGTTGCCTTTGCCGGGACGTAGAGTCGAAACGGCAGCCGTTTAAAGACAAGTTAGAACAGAATAAGAAGTA CCCTAATAAAGAGGAAGTCC
Downstream 100 bases:
>100_bases CAGATGTTTGAGAAATACGACACCGCCCTGGATAACTGGATTGAGGGCATTGTAGCGAGCGGCGATGATGACGCTCTGTT CGCCAGCGGCTATTTGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-NAD Kinase; NAD(+)/NADH Kinase; Inorganic Polyphosphate/ATP-NAD Kinase; Homolog NAD Kinase
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MANKFRLGLIINPLAGLGGSVALKGSDGVAEEALALGAEPKAHLRMRSALEQVLPYKERFIVHTAAGSMGEDLCRELGFE VQVYYQPHSEHTTAEDTREAVKALASETLDLLLFAGGDGTARDVFAEVDERQVVLGVPAGVKIHSGVYGITPKASGLVLK MLMQGELVSLMSADVMDIDEEAFRQGRVRARRFGEMLVPAEPRYVQAVKMGGKEVDELVLSDIAAEIVSEMDDSLYIMGS GSTVAAVMEELGLENTLLGVDLVQDRGLIASDLTAQQLLEQTENQPLKLVITLIGGQGHILGRGNQQLSPALIRRVGKEN ILIVATKTKLKALEGRPLIVDSGDPELDQALIGYYRVVTGYRDYVMYQVANPTE
Sequences:
>Translated_374_residues MANKFRLGLIINPLAGLGGSVALKGSDGVAEEALALGAEPKAHLRMRSALEQVLPYKERFIVHTAAGSMGEDLCRELGFE VQVYYQPHSEHTTAEDTREAVKALASETLDLLLFAGGDGTARDVFAEVDERQVVLGVPAGVKIHSGVYGITPKASGLVLK MLMQGELVSLMSADVMDIDEEAFRQGRVRARRFGEMLVPAEPRYVQAVKMGGKEVDELVLSDIAAEIVSEMDDSLYIMGS GSTVAAVMEELGLENTLLGVDLVQDRGLIASDLTAQQLLEQTENQPLKLVITLIGGQGHILGRGNQQLSPALIRRVGKEN ILIVATKTKLKALEGRPLIVDSGDPELDQALIGYYRVVTGYRDYVMYQVANPTE >Mature_373_residues ANKFRLGLIINPLAGLGGSVALKGSDGVAEEALALGAEPKAHLRMRSALEQVLPYKERFIVHTAAGSMGEDLCRELGFEV QVYYQPHSEHTTAEDTREAVKALASETLDLLLFAGGDGTARDVFAEVDERQVVLGVPAGVKIHSGVYGITPKASGLVLKM LMQGELVSLMSADVMDIDEEAFRQGRVRARRFGEMLVPAEPRYVQAVKMGGKEVDELVLSDIAAEIVSEMDDSLYIMGSG STVAAVMEELGLENTLLGVDLVQDRGLIASDLTAQQLLEQTENQPLKLVITLIGGQGHILGRGNQQLSPALIRRVGKENI LIVATKTKLKALEGRPLIVDSGDPELDQALIGYYRVVTGYRDYVMYQVANPTE
Specific function: Unknown
COG id: COG3199
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40415; Mature: 40284
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKFRLGLIINPLAGLGGSVALKGSDGVAEEALALGAEPKAHLRMRSALEQVLPYKERF CCCCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHE IVHTAAGSMGEDLCRELGFEVQVYYQPHSEHTTAEDTREAVKALASETLDLLLFAGGDGT EEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCC ARDVFAEVDERQVVLGVPAGVKIHSGVYGITPKASGLVLKMLMQGELVSLMSADVMDIDE HHHHHHHCCCCEEEEECCCCCEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH EAFRQGRVRARRFGEMLVPAEPRYVQAVKMGGKEVDELVLSDIAAEIVSEMDDSLYIMGS HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC GSTVAAVMEELGLENTLLGVDLVQDRGLIASDLTAQQLLEQTENQPLKLVITLIGGQGHI CCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEE LGRGNQQLSPALIRRVGKENILIVATKTKLKALEGRPLIVDSGDPELDQALIGYYRVVTG EECCCCCCCHHHHHHCCCCCEEEEEECHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHC YRDYVMYQVANPTE CCCEEEEEECCCCC >Mature Secondary Structure ANKFRLGLIINPLAGLGGSVALKGSDGVAEEALALGAEPKAHLRMRSALEQVLPYKERF CCCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHE IVHTAAGSMGEDLCRELGFEVQVYYQPHSEHTTAEDTREAVKALASETLDLLLFAGGDGT EEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCC ARDVFAEVDERQVVLGVPAGVKIHSGVYGITPKASGLVLKMLMQGELVSLMSADVMDIDE HHHHHHHCCCCEEEEECCCCCEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH EAFRQGRVRARRFGEMLVPAEPRYVQAVKMGGKEVDELVLSDIAAEIVSEMDDSLYIMGS HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC GSTVAAVMEELGLENTLLGVDLVQDRGLIASDLTAQQLLEQTENQPLKLVITLIGGQGHI CCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEE LGRGNQQLSPALIRRVGKENILIVATKTKLKALEGRPLIVDSGDPELDQALIGYYRVVTG EECCCCCCCHHHHHHCCCCCEEEEEECHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHC YRDYVMYQVANPTE CCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA