| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is trpG [H]
Identifier: 119775265
GI number: 119775265
Start: 2575678
End: 2576277
Strand: Direct
Name: trpG [H]
Synonym: Sama_2130
Alternate gene names: 119775265
Gene position: 2575678-2576277 (Clockwise)
Preceding gene: 119775264
Following gene: 119775266
Centisome position: 59.81
GC content: 57.17
Gene sequence:
>600_bases GTGAAACTCTATTTACTCGATAACTTCGACTCTTTTACTTACAACCTGGTCGACCAATTCCGCGCGCTGGGCTTTGAGGT AGTGATTTACCGTAACGACGTTGACCCACAGCAGCTGGCAGCCAAGTTACTGGCCGAGCCTCAAACCGCACTGGTACTCT CCCCTGGTCCGGGTGCTCCCCACGAGGCGGGTTGCATGATGGCACTGATTAAACTGGTGGCAGGAAAGCTGCCAATTCTC GGGATATGCCTGGGTCATCAGGCGTTGGTTGAGCACTACGGCGGCAAGGTAGAGCGCGCGCCAAGTGTGGTACACGGCAA GGCGAGCCCCACGGTTCATGACGGTCAGGGGATTTTCCGAGGGCTGCCCTCCCCCTTGCCGGTGGCACGCTATCACAGTT TGGTCGCAACCAAGGTGCCTGACGCCCTTAAGGTCATTGCCACTACCGAAGGCATGCCCATGGCGGTGCTCCACGAAGAA GACAAGGCGCTGGGTTTCCAGTTTCACCCTGAGTCGATTCTGACAACCCTTGGCAGTACCTTGCTGGTGCAAAGCCTGCA ATACCTCACCGGCTTGGCTGCCAAAGGAGAGCTGCAATGA
Upstream 100 bases:
>100_bases GTGCCGGTGTGGTGTATGACTCAGATCCCCAGGCAGAGGCAGACGAAACCCGTCAAAAAGCACAGGCAGTGATCTCTGCC ATCAAACTGGGAGGTGGCCT
Downstream 100 bases:
>100_bases GCAAGGATGTAAGACAACTCCTGGATAAAACCTACGGCGGTAACCCATTATCCCGCGAAGAAGCCAAATGCCTTTTTGCC TCGCTGGTGAGGGGCGAGCT
Product: anthranilate synthase component II
Products: NA
Alternate protein names: Glutamine amido-transferase [H]
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MKLYLLDNFDSFTYNLVDQFRALGFEVVIYRNDVDPQQLAAKLLAEPQTALVLSPGPGAPHEAGCMMALIKLVAGKLPIL GICLGHQALVEHYGGKVERAPSVVHGKASPTVHDGQGIFRGLPSPLPVARYHSLVATKVPDALKVIATTEGMPMAVLHEE DKALGFQFHPESILTTLGSTLLVQSLQYLTGLAAKGELQ
Sequences:
>Translated_199_residues MKLYLLDNFDSFTYNLVDQFRALGFEVVIYRNDVDPQQLAAKLLAEPQTALVLSPGPGAPHEAGCMMALIKLVAGKLPIL GICLGHQALVEHYGGKVERAPSVVHGKASPTVHDGQGIFRGLPSPLPVARYHSLVATKVPDALKVIATTEGMPMAVLHEE DKALGFQFHPESILTTLGSTLLVQSLQYLTGLAAKGELQ >Mature_199_residues MKLYLLDNFDSFTYNLVDQFRALGFEVVIYRNDVDPQQLAAKLLAEPQTALVLSPGPGAPHEAGCMMALIKLVAGKLPIL GICLGHQALVEHYGGKVERAPSVVHGKASPTVHDGQGIFRGLPSPLPVARYHSLVATKVPDALKVIATTEGMPMAVLHEE DKALGFQFHPESILTTLGSTLLVQSLQYLTGLAAKGELQ
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=186, Percent_Identity=58.0645161290323, Blast_Score=221, Evalue=3e-59, Organism=Escherichia coli, GI1789760, Length=188, Percent_Identity=47.8723404255319, Blast_Score=167, Evalue=5e-43, Organism=Escherichia coli, GI1788854, Length=190, Percent_Identity=26.8421052631579, Blast_Score=67, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6322638, Length=192, Percent_Identity=42.7083333333333, Blast_Score=149, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6324361, Length=219, Percent_Identity=27.8538812785388, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 21360; Mature: 21360
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYLLDNFDSFTYNLVDQFRALGFEVVIYRNDVDPQQLAAKLLAEPQTALVLSPGPGAP CEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCC HEAGCMMALIKLVAGKLPILGICLGHQALVEHYGGKVERAPSVVHGKASPTVHDGQGIFR CHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCCCEEECCCCCCEECCCHHHH GLPSPLPVARYHSLVATKVPDALKVIATTEGMPMAVLHEEDKALGFQFHPESILTTLGST CCCCCCCHHHHHHHHHHCCCHHHEEEEECCCCCEEEEECCCCCCCEEECHHHHHHHHHHH LLVQSLQYLTGLAAKGELQ HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKLYLLDNFDSFTYNLVDQFRALGFEVVIYRNDVDPQQLAAKLLAEPQTALVLSPGPGAP CEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCC HEAGCMMALIKLVAGKLPILGICLGHQALVEHYGGKVERAPSVVHGKASPTVHDGQGIFR CHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCCCEEECCCCCCEECCCHHHH GLPSPLPVARYHSLVATKVPDALKVIATTEGMPMAVLHEEDKALGFQFHPESILTTLGST CCCCCCCHHHHHHHHHHCCCHHHEEEEECCCCCEEEEECCCCCCCEEECHHHHHHHHHHH LLVQSLQYLTGLAAKGELQ HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]