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The map label for this gene is trpH [H]

Identifier: 119775263

GI number: 119775263

Start: 2572884

End: 2573744

Strand: Reverse

Name: trpH [H]

Synonym: Sama_2128

Alternate gene names: 119775263

Gene position: 2573744-2572884 (Counterclockwise)

Preceding gene: 119775271

Following gene: 119775262

Centisome position: 59.77

GC content: 56.45

Gene sequence:

>861_bases
ATGAACGATGAAAATTATTTGGTTGATCTCCACTGCCATACCACAGCGTCCGACGGACAACTTTCGCCCTCGGATGTGGT
CACCCGCGCCATTGAACGCGGCGTGAATTTGCTTGCGATTACCGATCACGACACCCTCGACGGGCTTGAAGAGGCCCACG
GCACCAACAATGCGTCGCAGTCGCCGCTCGAACTGGTTGACGGGGTAGAAATTTCAACCCGATGGCACAGTTACGATATC
CACATTGTGGCGCTGCAGGTGGACCGGCATCACCCTGAGTTACAGGCGTTTCTTGCGCGGCAACGGGAGCTAAGGGAAAT
CCGTGCCCGTGAAATAGGCAATCGTCTGACCAAGGCCGGTATCGAAGGTACCTTTGAAGCGGCAAAGGAACTGGCCGGAA
ACGCGGCTGTGAGCCGCGGCCACTACGCCAGGGTACTGGTTGAGCGGGGCATTGCCGCAGACATGGCCGGGGTATTCAAG
CGCTTTCTGGCCCGCAACAAAACCGGCTATGTGCCCAATAACTGGGGCGATATGGCCTCGGCGATTGCGATTATTCATCG
TGCCGGCGGTGTGGCAGTGCTTGCCCACCCCAGTGGCTATAAAATGTCGGCCAAGTGGCTGAAAAAATTGGTGCGGGAAT
TTAAAGAAGCTGGCGGCGATGCCATGGAAGTGGTGCTGGGGCAGCAAACATTAGAGGACAGAGCCAATTTGGTGGCGCTG
TCCCATCTCAACGGCTTATACGGCAGCTTGGGCAGCGATTTTCATTTTCCCGGCAGCTTTGTCGAGCTGGGTAAAAATCT
TTACCGACCACAGGGCGTGACCTGGGTCTGGCAAACCGAACTCTGGGGGACGAGGGAATGA

Upstream 100 bases:

>100_bases
TCATAATCTATGGGAACTCACTGATTCGGCCATTGAATACGGTCGGGAAGAGCTGAAAGTTTGAGGCGCTTTTCATAATG
CTTTCAAGTAGAATAAGCCT

Downstream 100 bases:

>100_bases
GTCAATTTTTTTATGTGCATGAGGTGAATCCTCAAAAACGCTTGATAGATCAGGCGGTCAATATTCTTAGAAGTGGCGGC
GTGATTGTGTATCCCACCGA

Product: PHP-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MNDENYLVDLHCHTTASDGQLSPSDVVTRAIERGVNLLAITDHDTLDGLEEAHGTNNASQSPLELVDGVEISTRWHSYDI
HIVALQVDRHHPELQAFLARQRELREIRAREIGNRLTKAGIEGTFEAAKELAGNAAVSRGHYARVLVERGIAADMAGVFK
RFLARNKTGYVPNNWGDMASAIAIIHRAGGVAVLAHPSGYKMSAKWLKKLVREFKEAGGDAMEVVLGQQTLEDRANLVAL
SHLNGLYGSLGSDFHFPGSFVELGKNLYRPQGVTWVWQTELWGTRE

Sequences:

>Translated_286_residues
MNDENYLVDLHCHTTASDGQLSPSDVVTRAIERGVNLLAITDHDTLDGLEEAHGTNNASQSPLELVDGVEISTRWHSYDI
HIVALQVDRHHPELQAFLARQRELREIRAREIGNRLTKAGIEGTFEAAKELAGNAAVSRGHYARVLVERGIAADMAGVFK
RFLARNKTGYVPNNWGDMASAIAIIHRAGGVAVLAHPSGYKMSAKWLKKLVREFKEAGGDAMEVVLGQQTLEDRANLVAL
SHLNGLYGSLGSDFHFPGSFVELGKNLYRPQGVTWVWQTELWGTRE
>Mature_286_residues
MNDENYLVDLHCHTTASDGQLSPSDVVTRAIERGVNLLAITDHDTLDGLEEAHGTNNASQSPLELVDGVEISTRWHSYDI
HIVALQVDRHHPELQAFLARQRELREIRAREIGNRLTKAGIEGTFEAAKELAGNAAVSRGHYARVLVERGIAADMAGVFK
RFLARNKTGYVPNNWGDMASAIAIIHRAGGVAVLAHPSGYKMSAKWLKKLVREFKEAGGDAMEVVLGQQTLEDRANLVAL
SHLNGLYGSLGSDFHFPGSFVELGKNLYRPQGVTWVWQTELWGTRE

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=284, Percent_Identity=52.8169014084507, Blast_Score=279, Evalue=2e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31556; Mature: 31556

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDENYLVDLHCHTTASDGQLSPSDVVTRAIERGVNLLAITDHDTLDGLEEAHGTNNASQ
CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCC
SPLELVDGVEISTRWHSYDIHIVALQVDRHHPELQAFLARQRELREIRAREIGNRLTKAG
CCHHHHCCCEEEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IEGTFEAAKELAGNAAVSRGHYARVLVERGIAADMAGVFKRFLARNKTGYVPNNWGDMAS
CCHHHHHHHHHHCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
AIAIIHRAGGVAVLAHPSGYKMSAKWLKKLVREFKEAGGDAMEVVLGQQTLEDRANLVAL
HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEHH
SHLNGLYGSLGSDFHFPGSFVELGKNLYRPQGVTWVWQTELWGTRE
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MNDENYLVDLHCHTTASDGQLSPSDVVTRAIERGVNLLAITDHDTLDGLEEAHGTNNASQ
CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCC
SPLELVDGVEISTRWHSYDIHIVALQVDRHHPELQAFLARQRELREIRAREIGNRLTKAG
CCHHHHCCCEEEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IEGTFEAAKELAGNAAVSRGHYARVLVERGIAADMAGVFKRFLARNKTGYVPNNWGDMAS
CCHHHHHHHHHHCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
AIAIIHRAGGVAVLAHPSGYKMSAKWLKKLVREFKEAGGDAMEVVLGQQTLEDRANLVAL
HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEHH
SHLNGLYGSLGSDFHFPGSFVELGKNLYRPQGVTWVWQTELWGTRE
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]