The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775218

Identifier: 119775218

GI number: 119775218

Start: 2526023

End: 2527171

Strand: Reverse

Name: 119775218

Synonym: Sama_2083

Alternate gene names: NA

Gene position: 2527171-2526023 (Counterclockwise)

Preceding gene: 119775219

Following gene: 119775213

Centisome position: 58.69

GC content: 52.57

Gene sequence:

>1149_bases
ATGAAACAAGCACCAGTCTCACTTGCGCTGGCCAGTGCGCTTCTGGCGATGTCAGGCTCAGCCATCGCCGAAACCGGAAA
AACCGATTTTAAGTTTGGCGGCTATATCAAGGCCGACGTGATGTTCAGTGATTACAGCAATGGCGCACCGGAGTCGGGTG
ATTTATCCCGCCAGTTTTATGTTCCGGGCACTATTTATGGTAAAGCGGGTAACGGCGAGCAAGTTGTCGATTTTCAGGCC
CGTGAAACCCGTTTCAACTTTAAAACCACCACAGATTTGGATGGGCATACCCTGACCGGCTTTATCGAGCTGGATTTTAT
GACCCACACCGACGGCAACGAGCGGGTTTCCAATAGCTACTCGCCCCGCATTCGCCATGCTTTTGTGACTTATGATAATT
GGACCGTGGGGCAAACCTGGACCACGTTCCAAAATCCAGGCGCTTTGCCTGAAAACCTCGACTTTGTCGGTGCGGCTGAC
GGTACCCCCTTCGTGCGTCAGGCGCAGCTGCGTTACACCAATGGCGGCTTCCAGTTCGCTGTTGAAAACCCCGAAACCAC
GGTCAGTGATTATCAAACGGGCAGTCGTATTGTTGGTGGCAGCGGTATGATGCCCGATGTGGTCGCACGTTATAACTTCA
AAACCGAAGGTGGCGCTTCCTTCTCTGTGGCGGCTATTGGTCGTCAGCTGACACTGGAAAACAGCAACTATGACGACTCA
ACCCTGGGCTTCGGTGCCAGTTTTGCCGGTGTTATTCCACTGGGTAAAGACGATCTGAAGTTCACTGCCACCTGGGGTGA
AGGTCTGGGCCGCTACATGGGGCTTAACTTTGCCAATGCCGCCTCCGTGGATGCTGACGGGCAACTCGATACCATTGGAT
CCTTTGGCGGCTTTGTCTCTTATCGTCATTGGTGGAACGAGCAGTGGCGCTCAAGCTTCACCCTGTCTGGTATGAAGGTC
GACAACAACGTCGATATCACCGGTGAGAACGTGAACAAAGATGCCTATTCAGCCTATGTGAACCTGCTGTACTCTCCCAG
CAAGCCGCTGACCTTTGGTGTGGAATACATGTTTGCCACCAATAGCAAAGAAAATGGCGTGGACGGTGACCTGAATCGGG
TCATTTTCTCGGCCAAATATGTGCTCTAA

Upstream 100 bases:

>100_bases
CTTTTCTACTTTTGTCTCATAGACCTATTGCTAATATTTCCCCGGTAACAATTTGTTCATAGTTCCTTTGATACATAATA
ACAATCAGGGAGCAACAAGA

Downstream 100 bases:

>100_bases
GCGCATTCAGCTCCCAGACTGAGAAACGTAAAAGGCGAACATAGTTCGCCTTTTTTGTTGGATGCCGTCTCCCGGCTATC
CCTTAAAACTGAATTCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKQAPVSLALASALLAMSGSAIAETGKTDFKFGGYIKADVMFSDYSNGAPESGDLSRQFYVPGTIYGKAGNGEQVVDFQA
RETRFNFKTTTDLDGHTLTGFIELDFMTHTDGNERVSNSYSPRIRHAFVTYDNWTVGQTWTTFQNPGALPENLDFVGAAD
GTPFVRQAQLRYTNGGFQFAVENPETTVSDYQTGSRIVGGSGMMPDVVARYNFKTEGGASFSVAAIGRQLTLENSNYDDS
TLGFGASFAGVIPLGKDDLKFTATWGEGLGRYMGLNFANAASVDADGQLDTIGSFGGFVSYRHWWNEQWRSSFTLSGMKV
DNNVDITGENVNKDAYSAYVNLLYSPSKPLTFGVEYMFATNSKENGVDGDLNRVIFSAKYVL

Sequences:

>Translated_382_residues
MKQAPVSLALASALLAMSGSAIAETGKTDFKFGGYIKADVMFSDYSNGAPESGDLSRQFYVPGTIYGKAGNGEQVVDFQA
RETRFNFKTTTDLDGHTLTGFIELDFMTHTDGNERVSNSYSPRIRHAFVTYDNWTVGQTWTTFQNPGALPENLDFVGAAD
GTPFVRQAQLRYTNGGFQFAVENPETTVSDYQTGSRIVGGSGMMPDVVARYNFKTEGGASFSVAAIGRQLTLENSNYDDS
TLGFGASFAGVIPLGKDDLKFTATWGEGLGRYMGLNFANAASVDADGQLDTIGSFGGFVSYRHWWNEQWRSSFTLSGMKV
DNNVDITGENVNKDAYSAYVNLLYSPSKPLTFGVEYMFATNSKENGVDGDLNRVIFSAKYVL
>Mature_382_residues
MKQAPVSLALASALLAMSGSAIAETGKTDFKFGGYIKADVMFSDYSNGAPESGDLSRQFYVPGTIYGKAGNGEQVVDFQA
RETRFNFKTTTDLDGHTLTGFIELDFMTHTDGNERVSNSYSPRIRHAFVTYDNWTVGQTWTTFQNPGALPENLDFVGAAD
GTPFVRQAQLRYTNGGFQFAVENPETTVSDYQTGSRIVGGSGMMPDVVARYNFKTEGGASFSVAAIGRQLTLENSNYDDS
TLGFGASFAGVIPLGKDDLKFTATWGEGLGRYMGLNFANAASVDADGQLDTIGSFGGFVSYRHWWNEQWRSSFTLSGMKV
DNNVDITGENVNKDAYSAYVNLLYSPSKPLTFGVEYMFATNSKENGVDGDLNRVIFSAKYVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41602; Mature: 41602

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQAPVSLALASALLAMSGSAIAETGKTDFKFGGYIKADVMFSDYSNGAPESGDLSRQFY
CCCCCHHHHHHHHHHHHCCCHHHHCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCEEEE
VPGTIYGKAGNGEQVVDFQARETRFNFKTTTDLDGHTLTGFIELDFMTHTDGNERVSNSY
CCEEEEECCCCCCEEEEEEECCEEEEEEEECCCCCCEEEEEEEEEEEEECCCCHHHCCCC
SPRIRHAFVTYDNWTVGQTWTTFQNPGALPENLDFVGAADGTPFVRQAQLRYTNGGFQFA
CCCEEEEEEEECCEECCCEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCEEEE
VENPETTVSDYQTGSRIVGGSGMMPDVVARYNFKTEGGASFSVAAIGRQLTLENSNYDDS
ECCCCCCHHHCCCCCEEECCCCCCCHHHHHCCCCCCCCCEEEEEECCEEEEECCCCCCCC
TLGFGASFAGVIPLGKDDLKFTATWGEGLGRYMGLNFANAASVDADGQLDTIGSFGGFVS
CCCCCCCCEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHH
YRHWWNEQWRSSFTLSGMKVDNNVDITGENVNKDAYSAYVNLLYSPSKPLTFGVEYMFAT
HHHHHCHHHCCEEEEEEEEECCCEEEECCCCCHHHHEEEEEEEECCCCCEEEEEEEEEEE
NSKENGVDGDLNRVIFSAKYVL
CCCCCCCCCCHHEEEEEEEECC
>Mature Secondary Structure
MKQAPVSLALASALLAMSGSAIAETGKTDFKFGGYIKADVMFSDYSNGAPESGDLSRQFY
CCCCCHHHHHHHHHHHHCCCHHHHCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCEEEE
VPGTIYGKAGNGEQVVDFQARETRFNFKTTTDLDGHTLTGFIELDFMTHTDGNERVSNSY
CCEEEEECCCCCCEEEEEEECCEEEEEEEECCCCCCEEEEEEEEEEEEECCCCHHHCCCC
SPRIRHAFVTYDNWTVGQTWTTFQNPGALPENLDFVGAADGTPFVRQAQLRYTNGGFQFA
CCCEEEEEEEECCEECCCEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCEEEE
VENPETTVSDYQTGSRIVGGSGMMPDVVARYNFKTEGGASFSVAAIGRQLTLENSNYDDS
ECCCCCCHHHCCCCCEEECCCCCCCHHHHHCCCCCCCCCEEEEEECCEEEEECCCCCCCC
TLGFGASFAGVIPLGKDDLKFTATWGEGLGRYMGLNFANAASVDADGQLDTIGSFGGFVS
CCCCCCCCEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHH
YRHWWNEQWRSSFTLSGMKVDNNVDITGENVNKDAYSAYVNLLYSPSKPLTFGVEYMFAT
HHHHHCHHHCCEEEEEEEEECCCEEEECCCCCHHHHEEEEEEEECCCCCEEEEEEEEEEE
NSKENGVDGDLNRVIFSAKYVL
CCCCCCCCCCHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA