| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is mltB [H]
Identifier: 119775164
GI number: 119775164
Start: 2467794
End: 2468999
Strand: Reverse
Name: mltB [H]
Synonym: Sama_2029
Alternate gene names: 119775164
Gene position: 2468999-2467794 (Counterclockwise)
Preceding gene: 119775167
Following gene: 119775163
Centisome position: 57.34
GC content: 53.07
Gene sequence:
>1206_bases TTGAAGTACCCATTCATCCTGGCCTCGTCACTGAGCATTCTCACTGCATTCTCAGCCGGTGCTGAGCCGCGCACCTTTGA GCAATGCATTGCCGATATCAAAGTGGATGCCCAGAGTGCTGGCATCTCCCCCCAAAGCATTGCTGTACTCGATAGTGTCA AACCATTACAGCGGGTGGTAGAGCTTGACCGAAGCCAACCCGAATTTACCCAGACCTTTGCCGATTACTTCAATAAAAGA GTCACGGAACGCCGGATATCGGAAGGGCAAAAAATGCTCAAAACCCACGGTGCCCTGCTTAACAAGTTGCAAAAGGAGTA TGGTGTACCACCCCAATATCTGCTGGCTTTTTGGGGACTTGAAACCAACTTTGGTGGCTACAAAGGTAAGATGCCGGTAC TGGATGCGTTGGCGACTCTGGCCTGTGACGCCCGCCGAAGCCAGTATTTCACCCAGGAACTGCTGCAGGCACTGCGGCTT GGCGATAAGTTTGGATTGTCATTTGAAGACATGGTCGGCTCCTGGGCCGGTGCCATGGGCCACACGCAGTTTATGCCAAC AACCTATCTCACCTATGCCGTGGACGGCGATGGTGATGGCAAGGTCGATTTGTGGAACAGTACCGAGGATGCTTTAAGCT CTGCTGCCAACTTTTTAATGCAGCTTGGTTGGCAGCGAAACGAGCGTTGGGGCAGGGAAGTTCTGCTGCCAAAACATTAT GACTATGAAAGCCTTGGCAGGGACCACCGTAAACCGTTGGCCGAGTGGCAAACGTTAGGGTTAACCACCGTATTTGGTCA TCCAATTCCCACCGCGCCCATGGACGCCGCCCTTTATTTACCAGCGGGGCATACAGGCCCGGCATTTTTGGGGTACAGCA ACTTTGAGGTGATTCAGCGTTGGAACCGCTCAGAGTTCTATGCGCTTGCGGTGGGGCATCTGGCCGACCGCATTAACGGG GCAAAGCCGCTTAAAGTTGCCCCACCTCTGCAGCCAAGAAGAACCCGGGATGGGCTCAAAGCCATGCAACAAAAGCTGAT TGAACTTGGGTACGATATCGGCGCTGCAGACGGCATTATCGGCAGCAAAACCTCTGCTGCAATCCGTGACTTTCAACGGC GCAACAAACTGGTGCCTGATGGTTTTGCCGACGATGCGACCCTTAATGCTCTGGGATTGGATGTCGCATCTATCAGCTCA AAATGA
Upstream 100 bases:
>100_bases CGGTTGCCTTGCGTCGCCCCTTGGTGCACGATGATGGCTCGCCTGAGTTCTTTTCTTTTGCCACCCGGCCTAGTCAGGCA CGACTAAAGGAGTCGACGTC
Downstream 100 bases:
>100_bases TTGCATCTTAAACAGCTGAAGCGTAACTTCGGGGCATTCTCATAATAAGGAGTGCCCCATGCAGTTGGAAGAGTTGAGCC ATGGTCAGCGACAGCGACTG
Product: membrane-bound lytic transglycolase-like protein
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKYPFILASSLSILTAFSAGAEPRTFEQCIADIKVDAQSAGISPQSIAVLDSVKPLQRVVELDRSQPEFTQTFADYFNKR VTERRISEGQKMLKTHGALLNKLQKEYGVPPQYLLAFWGLETNFGGYKGKMPVLDALATLACDARRSQYFTQELLQALRL GDKFGLSFEDMVGSWAGAMGHTQFMPTTYLTYAVDGDGDGKVDLWNSTEDALSSAANFLMQLGWQRNERWGREVLLPKHY DYESLGRDHRKPLAEWQTLGLTTVFGHPIPTAPMDAALYLPAGHTGPAFLGYSNFEVIQRWNRSEFYALAVGHLADRING AKPLKVAPPLQPRRTRDGLKAMQQKLIELGYDIGAADGIIGSKTSAAIRDFQRRNKLVPDGFADDATLNALGLDVASISS K
Sequences:
>Translated_401_residues MKYPFILASSLSILTAFSAGAEPRTFEQCIADIKVDAQSAGISPQSIAVLDSVKPLQRVVELDRSQPEFTQTFADYFNKR VTERRISEGQKMLKTHGALLNKLQKEYGVPPQYLLAFWGLETNFGGYKGKMPVLDALATLACDARRSQYFTQELLQALRL GDKFGLSFEDMVGSWAGAMGHTQFMPTTYLTYAVDGDGDGKVDLWNSTEDALSSAANFLMQLGWQRNERWGREVLLPKHY DYESLGRDHRKPLAEWQTLGLTTVFGHPIPTAPMDAALYLPAGHTGPAFLGYSNFEVIQRWNRSEFYALAVGHLADRING AKPLKVAPPLQPRRTRDGLKAMQQKLIELGYDIGAADGIIGSKTSAAIRDFQRRNKLVPDGFADDATLNALGLDVASISS K >Mature_401_residues MKYPFILASSLSILTAFSAGAEPRTFEQCIADIKVDAQSAGISPQSIAVLDSVKPLQRVVELDRSQPEFTQTFADYFNKR VTERRISEGQKMLKTHGALLNKLQKEYGVPPQYLLAFWGLETNFGGYKGKMPVLDALATLACDARRSQYFTQELLQALRL GDKFGLSFEDMVGSWAGAMGHTQFMPTTYLTYAVDGDGDGKVDLWNSTEDALSSAANFLMQLGWQRNERWGREVLLPKHY DYESLGRDHRKPLAEWQTLGLTTVFGHPIPTAPMDAALYLPAGHTGPAFLGYSNFEVIQRWNRSEFYALAVGHLADRING AKPLKVAPPLQPRRTRDGLKAMQQKLIELGYDIGAADGIIGSKTSAAIRDFQRRNKLVPDGFADDATLNALGLDVASISS K
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=289, Percent_Identity=31.1418685121107, Blast_Score=117, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 44375; Mature: 44375
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYPFILASSLSILTAFSAGAEPRTFEQCIADIKVDAQSAGISPQSIAVLDSVKPLQRVV CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHH ELDRSQPEFTQTFADYFNKRVTERRISEGQKMLKTHGALLNKLQKEYGVPPQYLLAFWGL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC ETNFGGYKGKMPVLDALATLACDARRSQYFTQELLQALRLGDKFGLSFEDMVGSWAGAMG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHCC HTQFMPTTYLTYAVDGDGDGKVDLWNSTEDALSSAANFLMQLGWQRNERWGREVLLPKHY CCCCCCCEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCHHCCCEECCCCCC DYESLGRDHRKPLAEWQTLGLTTVFGHPIPTAPMDAALYLPAGHTGPAFLGYSNFEVIQR CHHHHCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEEECCCCCCCCEECCCCHHHHHH WNRSEFYALAVGHLADRINGAKPLKVAPPLQPRRTRDGLKAMQQKLIELGYDIGAADGII CCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC GSKTSAAIRDFQRRNKLVPDGFADDATLNALGLDVASISSK CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHCCCC >Mature Secondary Structure MKYPFILASSLSILTAFSAGAEPRTFEQCIADIKVDAQSAGISPQSIAVLDSVKPLQRVV CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHH ELDRSQPEFTQTFADYFNKRVTERRISEGQKMLKTHGALLNKLQKEYGVPPQYLLAFWGL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC ETNFGGYKGKMPVLDALATLACDARRSQYFTQELLQALRLGDKFGLSFEDMVGSWAGAMG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHCC HTQFMPTTYLTYAVDGDGDGKVDLWNSTEDALSSAANFLMQLGWQRNERWGREVLLPKHY CCCCCCCEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCHHCCCEECCCCCC DYESLGRDHRKPLAEWQTLGLTTVFGHPIPTAPMDAALYLPAGHTGPAFLGYSNFEVIQR CHHHHCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEEECCCCCCCCEECCCCHHHHHH WNRSEFYALAVGHLADRINGAKPLKVAPPLQPRRTRDGLKAMQQKLIELGYDIGAADGII CCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC GSKTSAAIRDFQRRNKLVPDGFADDATLNALGLDVASISSK CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]