| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is estA [H]
Identifier: 119775157
GI number: 119775157
Start: 2458429
End: 2459109
Strand: Reverse
Name: estA [H]
Synonym: Sama_2022
Alternate gene names: 119775157
Gene position: 2459109-2458429 (Counterclockwise)
Preceding gene: 119775158
Following gene: 119775156
Centisome position: 57.11
GC content: 53.45
Gene sequence:
>681_bases ATGAACACAGAACAAACACCTTTGGACGCCATAGTGGTTGAACCCGCGGTACCTGCGCGTTACGCGGTAATTTGGCTCCA TGGCCTTGGGGATTCCGGGGCTGGGTTTGCCCCCATAGTGCCTGCGCTTTCGCTGCCAAAGGATGCCGGTATTCGCTTTA TATTCCCCCATGCGCCAGAACAGCCTGTGACCATCAACGGTGGTTATATCATGCGCGCCTGGTATGACATCAAAAGTATG GATTTGCACGATAGGGCGGATTTGGCGGGTGTGCTTGAATCAGAGCACCAGATAATGGCGCTGATTGAGGCGCAAATGGC AGCAGGTATCCCCAGTGAACGCATCCTGTTGGCCGGATTCAGTCAGGGTGGGGTAATGAGTCTTTTCTGTGGTTTGAGGT TTCATCAGCCCCTTGCTGGCGTGATGGCACTGTCATGCTACTTGCCGGGTGCCGATACCTTGCCCGAGAACTGCCATCCC GCCAATGCTTCGACCCCCATCTTGCAACACCATGGTGAGCAGGATGAGGTGGTGCCACTCTTTGCAGGCCAGATGGCCCA AAAGGCACTCCGTGATGCGGGTTATGACGTTGAATGGCAAAGTTTCAACATGGGTCATAGCGTATTACCTGCTCAGTTGA TGGAGATACGTCGCTGGTTATTGGCAAAACTGGTTAATTAG
Upstream 100 bases:
>100_bases AGATGCCGGTGCCGTGAGTTGGACATTGATATTGGACGATGATGAGCAGCTGGACGCCATAGCAGCCTTTTATGGACTGG AAAAGGATAAGAGATAAAAG
Downstream 100 bases:
>100_bases TGTGCATTTGGAGTGACACTGATATGAAGGCGCACCTCAGGGTGCGTTTTTTATTTGAAACAGTCTTCAGTGTTCATTCG ATGGTGCCGTAACAGGCGTC
Product: carboxylesterase
Products: NA
Alternate protein names: Esterase I [H]
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MNTEQTPLDAIVVEPAVPARYAVIWLHGLGDSGAGFAPIVPALSLPKDAGIRFIFPHAPEQPVTINGGYIMRAWYDIKSM DLHDRADLAGVLESEHQIMALIEAQMAAGIPSERILLAGFSQGGVMSLFCGLRFHQPLAGVMALSCYLPGADTLPENCHP ANASTPILQHHGEQDEVVPLFAGQMAQKALRDAGYDVEWQSFNMGHSVLPAQLMEIRRWLLAKLVN
Sequences:
>Translated_226_residues MNTEQTPLDAIVVEPAVPARYAVIWLHGLGDSGAGFAPIVPALSLPKDAGIRFIFPHAPEQPVTINGGYIMRAWYDIKSM DLHDRADLAGVLESEHQIMALIEAQMAAGIPSERILLAGFSQGGVMSLFCGLRFHQPLAGVMALSCYLPGADTLPENCHP ANASTPILQHHGEQDEVVPLFAGQMAQKALRDAGYDVEWQSFNMGHSVLPAQLMEIRRWLLAKLVN >Mature_226_residues MNTEQTPLDAIVVEPAVPARYAVIWLHGLGDSGAGFAPIVPALSLPKDAGIRFIFPHAPEQPVTINGGYIMRAWYDIKSM DLHDRADLAGVLESEHQIMALIEAQMAAGIPSERILLAGFSQGGVMSLFCGLRFHQPLAGVMALSCYLPGADTLPENCHP ANASTPILQHHGEQDEVVPLFAGQMAQKALRDAGYDVEWQSFNMGHSVLPAQLMEIRRWLLAKLVN
Specific function: Hydrolyzes carboxylic ester bonds with relatively broad substrate specificity [H]
COG id: COG0400
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase 2 family [H]
Homologues:
Organism=Homo sapiens, GI5453722, Length=223, Percent_Identity=39.4618834080717, Blast_Score=148, Evalue=5e-36, Organism=Homo sapiens, GI9966764, Length=224, Percent_Identity=37.9464285714286, Blast_Score=145, Evalue=2e-35, Organism=Homo sapiens, GI20270341, Length=222, Percent_Identity=31.0810810810811, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17508057, Length=216, Percent_Identity=34.7222222222222, Blast_Score=137, Evalue=6e-33, Organism=Saccharomyces cerevisiae, GI6323147, Length=216, Percent_Identity=33.7962962962963, Blast_Score=120, Evalue=2e-28, Organism=Drosophila melanogaster, GI45553055, Length=217, Percent_Identity=35.0230414746544, Blast_Score=148, Evalue=3e-36, Organism=Drosophila melanogaster, GI45553057, Length=217, Percent_Identity=35.0230414746544, Blast_Score=148, Evalue=3e-36, Organism=Drosophila melanogaster, GI21357257, Length=217, Percent_Identity=35.0230414746544, Blast_Score=148, Evalue=3e-36, Organism=Drosophila melanogaster, GI161078179, Length=211, Percent_Identity=29.3838862559242, Blast_Score=90, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003140 [H]
Pfam domain/function: PF02230 Abhydrolase_2 [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 24558; Mature: 24558
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTEQTPLDAIVVEPAVPARYAVIWLHGLGDSGAGFAPIVPALSLPKDAGIRFIFPHAPE CCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCHHCCCCCCCCCCCEEEEECCCCC QPVTINGGYIMRAWYDIKSMDLHDRADLAGVLESEHQIMALIEAQMAAGIPSERILLAGF CCEEECCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEC SQGGVMSLFCGLRFHQPLAGVMALSCYLPGADTLPENCHPANASTPILQHHGEQDEVVPL CCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEHH FAGQMAQKALRDAGYDVEWQSFNMGHSVLPAQLMEIRRWLLAKLVN HHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTEQTPLDAIVVEPAVPARYAVIWLHGLGDSGAGFAPIVPALSLPKDAGIRFIFPHAPE CCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCHHCCCCCCCCCCCEEEEECCCCC QPVTINGGYIMRAWYDIKSMDLHDRADLAGVLESEHQIMALIEAQMAAGIPSERILLAGF CCEEECCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEC SQGGVMSLFCGLRFHQPLAGVMALSCYLPGADTLPENCHPANASTPILQHHGEQDEVVPL CCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEHH FAGQMAQKALRDAGYDVEWQSFNMGHSVLPAQLMEIRRWLLAKLVN HHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA