Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yceF [C]

Identifier: 119775121

GI number: 119775121

Start: 2413483

End: 2414082

Strand: Direct

Name: yceF [C]

Synonym: Sama_1986

Alternate gene names: 119775121

Gene position: 2413483-2414082 (Clockwise)

Preceding gene: 119775109

Following gene: 119775124

Centisome position: 56.05

GC content: 53.0

Gene sequence:

>600_bases
ATGCGACCCTTAATTCTCGCCTCTACCTCAACTTTTCGGGCAGCACTGCTTGAAAAACTGGGCTTGCCATTTCAAGCCTT
GGCGCCGCACACCGATGAGACGCCCCTGCCCGGAGAATCTGCCATCGCACTGACCGAGCGGCTTGCCATTGCCAAGGCCA
AAGCCCTGGCATGTGACGTGCCAACCAATGCGCTCATTATCGGTTCTGATCAGGTGGCAGTGGTTGACGGGAAGATTGTT
GGCAAACCGCTGAGCGAAGAAAATGCCATTAATCAGCTAAAGGCGCAGCGCGGAAAAAGCATTGTCTTTTATACGGCGCT
CGCCCTGCACGATGTTGCAAAGGACACTACCCTCTCGCTGGTAGAGCCTTTTACCGTGCACTTTCGTGACCTCAGTGATG
ACGAAATAGTGCAATACGTAAGAAAAGAGCAACCCCTGTGGTGTGCTGGCAGCTTCAAATCTGAAGGATTGGGTATTTGC
CTGTTTGAACGCCTCGAAGGCCGCGACCCCAATACTTTGATTGGCTTACCCCTGATAGCCTTGGTGGACTTACTCAAACA
ATCCGGGCTTTGTGTGCTTACGGGCGCTAGCCCTCGATAA

Upstream 100 bases:

>100_bases
GGCTGATTGAGGTTAACATGAAGGCTAACTATGCACGCAGGTTAACTATGCACGGTTTAAAATACCCAGTTAACAGTTCA
GACCCAAAGGCCAGTATCCA

Downstream 100 bases:

>100_bases
TGAGTTTTAGACGATATCAGGAGCTTATTACAGAGGTGACGCCATTATCTGTGTGAACGCAATCGGCGCAATCAGTCTGC
GAAGAGGGCATACATCAGGA

Product: septum formation protein Maf

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRPLILASTSTFRAALLEKLGLPFQALAPHTDETPLPGESAIALTERLAIAKAKALACDVPTNALIIGSDQVAVVDGKIV
GKPLSEENAINQLKAQRGKSIVFYTALALHDVAKDTTLSLVEPFTVHFRDLSDDEIVQYVRKEQPLWCAGSFKSEGLGIC
LFERLEGRDPNTLIGLPLIALVDLLKQSGLCVLTGASPR

Sequences:

>Translated_199_residues
MRPLILASTSTFRAALLEKLGLPFQALAPHTDETPLPGESAIALTERLAIAKAKALACDVPTNALIIGSDQVAVVDGKIV
GKPLSEENAINQLKAQRGKSIVFYTALALHDVAKDTTLSLVEPFTVHFRDLSDDEIVQYVRKEQPLWCAGSFKSEGLGIC
LFERLEGRDPNTLIGLPLIALVDLLKQSGLCVLTGASPR
>Mature_199_residues
MRPLILASTSTFRAALLEKLGLPFQALAPHTDETPLPGESAIALTERLAIAKAKALACDVPTNALIIGSDQVAVVDGKIV
GKPLSEENAINQLKAQRGKSIVFYTALALHDVAKDTTLSLVEPFTVHFRDLSDDEIVQYVRKEQPLWCAGSFKSEGLGIC
LFERLEGRDPNTLIGLPLIALVDLLKQSGLCVLTGASPR

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=190, Percent_Identity=27.8947368421053, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI87081830, Length=195, Percent_Identity=60, Blast_Score=215, Evalue=1e-57,
Organism=Escherichia coli, GI1789646, Length=185, Percent_Identity=32.972972972973, Blast_Score=97, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI193202443, Length=183, Percent_Identity=31.1475409836066, Blast_Score=77, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 21384; Mature: 21384

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLILASTSTFRAALLEKLGLPFQALAPHTDETPLPGESAIALTERLAIAKAKALACDV
CCCEEEECCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECC
PTNALIIGSDQVAVVDGKIVGKPLSEENAINQLKAQRGKSIVFYTALALHDVAKDTTLSL
CCCEEEECCCCEEEECCEEECCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCHHHH
VEPFTVHFRDLSDDEIVQYVRKEQPLWCAGSFKSEGLGICLFERLEGRDPNTLIGLPLIA
HCCEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEHHCCCCCCEEEHHHHHH
LVDLLKQSGLCVLTGASPR
HHHHHHHCCEEEEECCCCC
>Mature Secondary Structure
MRPLILASTSTFRAALLEKLGLPFQALAPHTDETPLPGESAIALTERLAIAKAKALACDV
CCCEEEECCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECC
PTNALIIGSDQVAVVDGKIVGKPLSEENAINQLKAQRGKSIVFYTALALHDVAKDTTLSL
CCCEEEECCCCEEEECCEEECCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCHHHH
VEPFTVHFRDLSDDEIVQYVRKEQPLWCAGSFKSEGLGICLFERLEGRDPNTLIGLPLIA
HCCEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEHHCCCCCCEEEHHHHHH
LVDLLKQSGLCVLTGASPR
HHHHHHHCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA