| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is plsX
Identifier: 119775118
GI number: 119775118
Start: 2411305
End: 2412333
Strand: Reverse
Name: plsX
Synonym: Sama_1983
Alternate gene names: 119775118
Gene position: 2412333-2411305 (Counterclockwise)
Preceding gene: 119775119
Following gene: 119775117
Centisome position: 56.02
GC content: 51.51
Gene sequence:
>1029_bases ATGACGAATCTGACGCTTGCGTTAGATGCGATGGGGGGCGATCACGGCCCCCAAGTCACGGTGCCTGCGGCTTTGCAGGC ACTTCGACTACACCCTAAGCTCTCCCTCCTGCTCGTCGGTGACGAGACTCAAATATCCCCGTATCTTTCTTCTGCTGAGA TAGACGTTCGCAGCAGGATAACCCTTGTGCATACCACCGAAGTGGTGCGTATGGACGATAAGCCCGCAACTGCGCTCAGA CATGCAAAAAACAGCTCCATGCGACTGGCCATAGAACAGGTTCGTGATGGCATGGCTGATGGCTGTGTCAGTGCCGGTAA CACTGGCGCGCTGATGGCGATGGCCAAGGTACTGCTTAAAATGTTGCCCGGTGTCGACAGGCCCGCGTTGGTCAGTTGCT TGCCGGCTATCAATGGTAAACCCGTTTATTTGCTCGATCTTGGTGCCAACATTCAGTGCGACTACGATACCTTGTTCCAA TTTGCGGTGATGGGCTCAGTGCTCAGTGAAGCGGTCGATAAGATTGCCCGCCCCAAGGTCGCGCTTCTGAATGTGGGCAT TGAAGAATGCAAGGGCAATGGCGATGTGCAGCAGGCTGCACAATTACTGCTTCATACTCCCCAGCTCAACTATGCCGGCT TTATTGAAGGCGATGAAATCTACAGTGGAAAAGTGGATGTCATCGTTTGTGACGGCTTTGTGGGCAACATCACACTCAAA ACCTCAGAAGGCATTGCCAGACTGCTGGTTCATCAATTAAAACAAGGCCTGGCCAAAGGCTTTGTGGTTCGAATACTTGC GCGTTTGCTCGCGCCCCGCATTCAGAAAGTACTCAACCAGATGAACCCCGACCACTATAACGGAGCAAGTCTGTTAGGAT TGCGCGCAGTAGTAGTGAAAAGCCACGGTAATGCAGACGAACACGCCTATATACAAGCAATTAGTCTTGCCTACACCGAG GCAAAACGTCGACTTCCAGAGATGATCAAAGATCGTCTTGAGTCGATTCTTTTAGATATCAATAGCTGA
Upstream 100 bases:
>100_bases TAGACGCTACCAGCGGTGAACTGCATCTGCGTCACAATGTGACCGCTGATGGTTACTACCGTGGTAAGAAGGTTATCAAC AAGTAATTGTTGGCCTTCCT
Downstream 100 bases:
>100_bases TTTCTCCTTAAACTATGCATACAAAAATTCTTGGAACTGGCAGTTACCTGCCGGCTCAGGTGCGTAGCAATCTCGATCTG GAAAAAATGGTGGATACCAG
Product: putative glycerol-3-phosphate acyltransferase PlsX
Products: NA
Alternate protein names: Acyl-ACP phosphotransacylase; Acyl-[acyl-carrier-protein]--phosphate acyltransferase; Phosphate-acyl-ACP acyltransferase
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTNLTLALDAMGGDHGPQVTVPAALQALRLHPKLSLLLVGDETQISPYLSSAEIDVRSRITLVHTTEVVRMDDKPATALR HAKNSSMRLAIEQVRDGMADGCVSAGNTGALMAMAKVLLKMLPGVDRPALVSCLPAINGKPVYLLDLGANIQCDYDTLFQ FAVMGSVLSEAVDKIARPKVALLNVGIEECKGNGDVQQAAQLLLHTPQLNYAGFIEGDEIYSGKVDVIVCDGFVGNITLK TSEGIARLLVHQLKQGLAKGFVVRILARLLAPRIQKVLNQMNPDHYNGASLLGLRAVVVKSHGNADEHAYIQAISLAYTE AKRRLPEMIKDRLESILLDINS
Sequences:
>Translated_342_residues MTNLTLALDAMGGDHGPQVTVPAALQALRLHPKLSLLLVGDETQISPYLSSAEIDVRSRITLVHTTEVVRMDDKPATALR HAKNSSMRLAIEQVRDGMADGCVSAGNTGALMAMAKVLLKMLPGVDRPALVSCLPAINGKPVYLLDLGANIQCDYDTLFQ FAVMGSVLSEAVDKIARPKVALLNVGIEECKGNGDVQQAAQLLLHTPQLNYAGFIEGDEIYSGKVDVIVCDGFVGNITLK TSEGIARLLVHQLKQGLAKGFVVRILARLLAPRIQKVLNQMNPDHYNGASLLGLRAVVVKSHGNADEHAYIQAISLAYTE AKRRLPEMIKDRLESILLDINS >Mature_341_residues TNLTLALDAMGGDHGPQVTVPAALQALRLHPKLSLLLVGDETQISPYLSSAEIDVRSRITLVHTTEVVRMDDKPATALRH AKNSSMRLAIEQVRDGMADGCVSAGNTGALMAMAKVLLKMLPGVDRPALVSCLPAINGKPVYLLDLGANIQCDYDTLFQF AVMGSVLSEAVDKIARPKVALLNVGIEECKGNGDVQQAAQLLLHTPQLNYAGFIEGDEIYSGKVDVIVCDGFVGNITLKT SEGIARLLVHQLKQGLAKGFVVRILARLLAPRIQKVLNQMNPDHYNGASLLGLRAVVVKSHGNADEHAYIQAISLAYTEA KRRLPEMIKDRLESILLDINS
Specific function: Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
COG id: COG0416
COG function: function code I; Fatty acid/phospholipid biosynthesis enzyme
Gene ontology:
Cell location: Cytoplasm. Note=Associated with the membrane possibly through plsY (By similarity)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsX family
Homologues:
Organism=Escherichia coli, GI87081831, Length=339, Percent_Identity=49.5575221238938, Blast_Score=331, Evalue=4e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSX_SHEAM (A1S732)
Other databases:
- EMBL: CP000507 - RefSeq: YP_927858.1 - ProteinModelPortal: A1S732 - SMR: A1S732 - STRING: A1S732 - GeneID: 4604233 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_1983 - NMPDR: fig|326297.7.peg.1864 - eggNOG: COG0416 - HOGENOM: HBG288268 - OMA: EGFSGNI - PhylomeDB: A1S732 - ProtClustDB: PRK05331 - GO: GO:0005737 - HAMAP: MF_00019 - InterPro: IPR003664 - InterPro: IPR012281 - PIRSF: PIRSF002465 - TIGRFAMs: TIGR00182
Pfam domain/function: PF02504 FA_synthesis
EC number: NA
Molecular weight: Translated: 36885; Mature: 36753
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLTLALDAMGGDHGPQVTVPAALQALRLHPKLSLLLVGDETQISPYLSSAEIDVRSRI CCCEEEEEEECCCCCCCEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEHHHCE TLVHTTEVVRMDDKPATALRHAKNSSMRLAIEQVRDGMADGCVSAGNTGALMAMAKVLLK EEEEEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHH MLPGVDRPALVSCLPAINGKPVYLLDLGANIQCDYDTLFQFAVMGSVLSEAVDKIARPKV HCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCE ALLNVGIEECKGNGDVQQAAQLLLHTPQLNYAGFIEGDEIYSGKVDVIVCDGFVGNITLK EEEECCHHHHCCCCCHHHHHHHHHCCCCCCCCEEECCCEEECCCEEEEEECCCCCEEEEE TSEGIARLLVHQLKQGLAKGFVVRILARLLAPRIQKVLNQMNPDHYNGASLLGLRAVVVK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEE SHGNADEHAYIQAISLAYTEAKRRLPEMIKDRLESILLDINS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TNLTLALDAMGGDHGPQVTVPAALQALRLHPKLSLLLVGDETQISPYLSSAEIDVRSRI CCEEEEEEECCCCCCCEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEHHHCE TLVHTTEVVRMDDKPATALRHAKNSSMRLAIEQVRDGMADGCVSAGNTGALMAMAKVLLK EEEEEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHH MLPGVDRPALVSCLPAINGKPVYLLDLGANIQCDYDTLFQFAVMGSVLSEAVDKIARPKV HCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCE ALLNVGIEECKGNGDVQQAAQLLLHTPQLNYAGFIEGDEIYSGKVDVIVCDGFVGNITLK EEEECCHHHHCCCCCHHHHHHHHHCCCCCCCCEEECCCEEECCCEEEEEECCCCCEEEEE TSEGIARLLVHQLKQGLAKGFVVRILARLLAPRIQKVLNQMNPDHYNGASLLGLRAVVVK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEE SHGNADEHAYIQAISLAYTEAKRRLPEMIKDRLESILLDINS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA