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The map label for this gene is ycgN [C]

Identifier: 119775062

GI number: 119775062

Start: 2355706

End: 2356146

Strand: Reverse

Name: ycgN [C]

Synonym: Sama_1927

Alternate gene names: 119775062

Gene position: 2356146-2355706 (Counterclockwise)

Preceding gene: 119775063

Following gene: 119775059

Centisome position: 54.72

GC content: 48.07

Gene sequence:

>441_bases
ATGGAATTTTGGAAAACCAAACGTCTGGAAGAGCTGAATCCTGAAGAATGGGAATCTCTTTGCGACGGTTGTGGTAAATG
TTGTCTCAATAAAATCATTGATGACGAAACTGATGAGCTGTATTACACCAACGCGGCTTGTAAGTTGCTTGACCGGGATG
CCTGTCATTGTCGTCATTACAGCGAACGCTTTACTTTCGTTCCGGGCTGCGCGGCTATTACACCTGATAATATCGCCAGT
TTGACCTGGTTGCCGGATAGCTGTGCCTATGTCCGCTTGTTTCAAGGCAGGGATTTGCCCAGCTGGCACCCGCTTGTCAC
AGGTTCAAAAGAGGCGATGCATGCTGCGGGTATGTCGGTGAAAGGCAAGGCCGTTTGCGAAACCAAGGTGAGATATCTGG
AAGACCATATCGTGCTTTGGCCACTTAAAGATGTCGATTAA

Upstream 100 bases:

>100_bases
TTGCCCTGGCGGTGGTGCATCTTTCGGATCGCATCAAGTTTCAACTGGGCGAATAAGGTATAATGCTGCGTTTGTTCACG
TATGCCGGTAGTCTGTTGTG

Downstream 100 bases:

>100_bases
AAAACGCCCCATAGAGGGCGTTTTTTATTGAAGGGCCTTGTTGACCACACCCAAATAAAATCAACAAGGTGTGTTTCAGG
CAGACTTCTTCAGCATTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MEFWKTKRLEELNPEEWESLCDGCGKCCLNKIIDDETDELYYTNAACKLLDRDACHCRHYSERFTFVPGCAAITPDNIAS
LTWLPDSCAYVRLFQGRDLPSWHPLVTGSKEAMHAAGMSVKGKAVCETKVRYLEDHIVLWPLKDVD

Sequences:

>Translated_146_residues
MEFWKTKRLEELNPEEWESLCDGCGKCCLNKIIDDETDELYYTNAACKLLDRDACHCRHYSERFTFVPGCAAITPDNIAS
LTWLPDSCAYVRLFQGRDLPSWHPLVTGSKEAMHAAGMSVKGKAVCETKVRYLEDHIVLWPLKDVD
>Mature_146_residues
MEFWKTKRLEELNPEEWESLCDGCGKCCLNKIIDDETDELYYTNAACKLLDRDACHCRHYSERFTFVPGCAAITPDNIAS
LTWLPDSCAYVRLFQGRDLPSWHPLVTGSKEAMHAAGMSVKGKAVCETKVRYLEDHIVLWPLKDVD

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family

Homologues:

Organism=Escherichia coli, GI145693117, Length=139, Percent_Identity=51.7985611510791, Blast_Score=164, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1927_SHEAM (A1S6X6)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_927802.1
- STRING:   A1S6X6
- GeneID:   4604177
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_1927
- eggNOG:   COG2983
- HOGENOM:   HBG490440
- OMA:   TCQCSDY
- PhylomeDB:   A1S6X6
- ProtClustDB:   PRK05170
- HAMAP:   MF_00676
- InterPro:   IPR008228
- InterPro:   IPR005358
- PIRSF:   PIRSF006173

Pfam domain/function: PF03692 UPF0153

EC number: NA

Molecular weight: Translated: 16690; Mature: 16690

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFWKTKRLEELNPEEWESLCDGCGKCCLNKIIDDETDELYYTNAACKLLDRDACHCRHY
CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCHHHHHH
SERFTFVPGCAAITPDNIASLTWLPDSCAYVRLFQGRDLPSWHPLVTGSKEAMHAAGMSV
HCCEEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCC
KGKAVCETKVRYLEDHIVLWPLKDVD
CCCHHHHHHHHHHHCCEEEEECCCCC
>Mature Secondary Structure
MEFWKTKRLEELNPEEWESLCDGCGKCCLNKIIDDETDELYYTNAACKLLDRDACHCRHY
CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCHHHHHH
SERFTFVPGCAAITPDNIASLTWLPDSCAYVRLFQGRDLPSWHPLVTGSKEAMHAAGMSV
HCCEEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCC
KGKAVCETKVRYLEDHIVLWPLKDVD
CCCHHHHHHHHHHHCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA