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The map label for this gene is ybhK [C]

Identifier: 119774939

GI number: 119774939

Start: 2195616

End: 2196524

Strand: Direct

Name: ybhK [C]

Synonym: Sama_1804

Alternate gene names: 119774939

Gene position: 2195616-2196524 (Clockwise)

Preceding gene: 119774936

Following gene: 119774942

Centisome position: 50.99

GC content: 52.26

Gene sequence:

>909_bases
ATGGACATATTGCAATTCAATGAATATCGTAAGGTCGTCGCAATCGGTGGTGGACACGGCCTTGGACGAGTGCTTTCCAG
TCTTTCATTTCTTGGTCCCAGACTGACAGGCATTGTGGCGACCACGGATAACGGAGGCTCCACAGGTCGTCTGCGCGCAC
AGCACGACTGCATTGCCTGGGGCGATCTTCGTAACTGCCTGTCTCAGCTGGCTGATAGACCCTCTGTCGGCTCTTTGCTC
TTTGAATATCGATTTGAAGGTGAGTCGGAGCTCGGTGGCCATAACCTTGGCAACCTCATCCTCTATGCCCTGGACCAGCT
GTGTGTTCGTCCGTTGGACGCAGTGAATCTCATCCGTGGCATGCTGAAAATAGAATGTAAACTTATCCCCATGTCCGAAC
AACCTACGCACCTGGTTGCACTGGAGGCCTGCGGCAATAAGGTGTTTGGTGAATTGGATGTGGACAGGCTTGAGAGCCAT
CCAATTGCCCTGTCCCTGGAACCCCTGGTCGAGCCCACCAACGAGGCTTGCCTTGCCATCGAAGAAGCGGATTTGATTGT
GCTCGGCCCGGGAAGCTTTTTGACGTCAACCTTACCGGCACTGCTCCTTCCCAAAGTCGCAGCATCAATTCGCCGAGCAA
ATGCCAAAGTGATTTTGATTGATAACCTCACCGCAGAGGTTTCCTCAGCCGCAAACCATTTAACGCTCAAGGAGCGTATC
GAATGGTGTCATCAACTAATAGGTAAACCGGTTATTGACCGGGTTTTGTGTCACGCTGAACAGGAATTCACCGACGGCAT
CTGTCATTACCAGCCTCTTCGCAGCAAGCATCATCAAGGTTTGCATGATACTCAGGCGCTTGCCAAAGCCATTATGGCGC
CTGTGGGTCGCAAACGTTTGATAGCCTAG

Upstream 100 bases:

>100_bases
CAAAATTTATGACTGTATAATCTGAGCGATTTGCCTAAACTGGTTGGCGTATGTAACCGACAAGGGGTGTCGGTGTTGTA
AATGCATCAAGGAAGCTGAT

Downstream 100 bases:

>100_bases
CGACGAGAGGGGTTTGATTAAAAAAGGCTGCACCTGGCAGCCTTTTTTTTCACATCAATTTGTTTTGTAAAATCAGAGCA
CTGCTGCAATCGCGCTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MDILQFNEYRKVVAIGGGHGLGRVLSSLSFLGPRLTGIVATTDNGGSTGRLRAQHDCIAWGDLRNCLSQLADRPSVGSLL
FEYRFEGESELGGHNLGNLILYALDQLCVRPLDAVNLIRGMLKIECKLIPMSEQPTHLVALEACGNKVFGELDVDRLESH
PIALSLEPLVEPTNEACLAIEEADLIVLGPGSFLTSTLPALLLPKVAASIRRANAKVILIDNLTAEVSSAANHLTLKERI
EWCHQLIGKPVIDRVLCHAEQEFTDGICHYQPLRSKHHQGLHDTQALAKAIMAPVGRKRLIA

Sequences:

>Translated_302_residues
MDILQFNEYRKVVAIGGGHGLGRVLSSLSFLGPRLTGIVATTDNGGSTGRLRAQHDCIAWGDLRNCLSQLADRPSVGSLL
FEYRFEGESELGGHNLGNLILYALDQLCVRPLDAVNLIRGMLKIECKLIPMSEQPTHLVALEACGNKVFGELDVDRLESH
PIALSLEPLVEPTNEACLAIEEADLIVLGPGSFLTSTLPALLLPKVAASIRRANAKVILIDNLTAEVSSAANHLTLKERI
EWCHQLIGKPVIDRVLCHAEQEFTDGICHYQPLRSKHHQGLHDTQALAKAIMAPVGRKRLIA
>Mature_302_residues
MDILQFNEYRKVVAIGGGHGLGRVLSSLSFLGPRLTGIVATTDNGGSTGRLRAQHDCIAWGDLRNCLSQLADRPSVGSLL
FEYRFEGESELGGHNLGNLILYALDQLCVRPLDAVNLIRGMLKIECKLIPMSEQPTHLVALEACGNKVFGELDVDRLESH
PIALSLEPLVEPTNEACLAIEEADLIVLGPGSFLTSTLPALLLPKVAASIRRANAKVILIDNLTAEVSSAANHLTLKERI
EWCHQLIGKPVIDRVLCHAEQEFTDGICHYQPLRSKHHQGLHDTQALAKAIMAPVGRKRLIA

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=290, Percent_Identity=52.0689655172414, Blast_Score=252, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 32889; Mature: 32889

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILQFNEYRKVVAIGGGHGLGRVLSSLSFLGPRLTGIVATTDNGGSTGRLRAQHDCIAW
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCEEH
GDLRNCLSQLADRPSVGSLLFEYRFEGESELGGHNLGNLILYALDQLCVRPLDAVNLIRG
HHHHHHHHHHHCCCCHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
MLKIECKLIPMSEQPTHLVALEACGNKVFGELDVDRLESHPIALSLEPLVEPTNEACLAI
HHHEEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHCCCCEEEEEHHCCCCCCCCEEEE
EEADLIVLGPGSFLTSTLPALLLPKVAASIRRANAKVILIDNLTAEVSSAANHLTLKERI
ECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHH
EWCHQLIGKPVIDRVLCHAEQEFTDGICHYQPLRSKHHQGLHDTQALAKAIMAPVGRKRL
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHC
IA
CC
>Mature Secondary Structure
MDILQFNEYRKVVAIGGGHGLGRVLSSLSFLGPRLTGIVATTDNGGSTGRLRAQHDCIAW
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCEEH
GDLRNCLSQLADRPSVGSLLFEYRFEGESELGGHNLGNLILYALDQLCVRPLDAVNLIRG
HHHHHHHHHHHCCCCHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
MLKIECKLIPMSEQPTHLVALEACGNKVFGELDVDRLESHPIALSLEPLVEPTNEACLAI
HHHEEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHCCCCEEEEEHHCCCCCCCCEEEE
EEADLIVLGPGSFLTSTLPALLLPKVAASIRRANAKVILIDNLTAEVSSAANHLTLKERI
ECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHH
EWCHQLIGKPVIDRVLCHAEQEFTDGICHYQPLRSKHHQGLHDTQALAKAIMAPVGRKRL
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHC
IA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]