| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is crcB
Identifier: 119774910
GI number: 119774910
Start: 2170764
End: 2171138
Strand: Direct
Name: crcB
Synonym: Sama_1775
Alternate gene names: 119774910
Gene position: 2170764-2171138 (Clockwise)
Preceding gene: 119774909
Following gene: 119774911
Centisome position: 50.41
GC content: 49.6
Gene sequence:
>375_bases ATGAATAACGTGCTCTATATTGCCGCGGGAGGTGCTATAGGTGCAGTTTTGCGCTATTCCATCTCGATTCTTGCGTTACA ACTCTTTGGCACCGGATTTCCTTTTGGTACACTCATCGTCAACGTGGCGGGATCCTTTTTAATGGGATGCATATACGCCC TGGCGGAGCTCAGCCATATTGGTCCTGAGTGGAAAGCCCTGATTGGTGTTGGCCTTCTGGGTGCTTTAACGACGTTTTCC ACCTTCTCAAACGAAACCTTGCTGCTGTTGCAGCAGGGTGAACTTGTGAAGGCGAGCCTGAATGTGCTTCTGAACCTGAT ACTTTGCCTGACCGTGGTGTATCTAGGGCAGCAGCTGATTTATTCCCGCGTTTAA
Upstream 100 bases:
>100_bases AGCCGAATTTACCAGCCCACCGCGCGGGGTTTTGAAAAGCGCATTCGAGATAAACTTGCTCATCTCGACGCACTGAATCA ACAAAGTGGGCGAAAACGCT
Downstream 100 bases:
>100_bases CTTATAAGACAACAAGTATGTTAGATACCAAATATCTCCGTAATGAACTGGAATTCACCAAAGAGCGTCTGGCCGCACGC GGCTTCGCGCTGGACATCGA
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNNVLYIAAGGAIGAVLRYSISILALQLFGTGFPFGTLIVNVAGSFLMGCIYALAELSHIGPEWKALIGVGLLGALTTFS TFSNETLLLLQQGELVKASLNVLLNLILCLTVVYLGQQLIYSRV
Sequences:
>Translated_124_residues MNNVLYIAAGGAIGAVLRYSISILALQLFGTGFPFGTLIVNVAGSFLMGCIYALAELSHIGPEWKALIGVGLLGALTTFS TFSNETLLLLQQGELVKASLNVLLNLILCLTVVYLGQQLIYSRV >Mature_124_residues MNNVLYIAAGGAIGAVLRYSISILALQLFGTGFPFGTLIVNVAGSFLMGCIYALAELSHIGPEWKALIGVGLLGALTTFS TFSNETLLLLQQGELVKASLNVLLNLILCLTVVYLGQQLIYSRV
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
Organism=Escherichia coli, GI1786842, Length=99, Percent_Identity=42.4242424242424, Blast_Score=73, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_SHEAM (A1S6H4)
Other databases:
- EMBL: CP000507 - RefSeq: YP_927650.1 - STRING: A1S6H4 - GeneID: 4604025 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_1775 - eggNOG: COG0239 - HOGENOM: HBG753179 - OMA: LISELCV - PhylomeDB: A1S6H4 - ProtClustDB: PRK14197 - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13164; Mature: 13164
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x137de868)-; HASH(0x13f4ba30)-; HASH(0x1405f588)-; HASH(0x14083e6c)-;
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVLYIAAGGAIGAVLRYSISILALQLFGTGFPFGTLIVNVAGSFLMGCIYALAELSHI CCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GPEWKALIGVGLLGALTTFSTFSNETLLLLQQGELVKASLNVLLNLILCLTVVYLGQQLI CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH YSRV HHCH >Mature Secondary Structure MNNVLYIAAGGAIGAVLRYSISILALQLFGTGFPFGTLIVNVAGSFLMGCIYALAELSHI CCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GPEWKALIGVGLLGALTTFSTFSNETLLLLQQGELVKASLNVLLNLILCLTVVYLGQQLI CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH YSRV HHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA