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The map label for this gene is yciM [H]

Identifier: 119774874

GI number: 119774874

Start: 2128642

End: 2129802

Strand: Direct

Name: yciM [H]

Synonym: Sama_1739

Alternate gene names: 119774874

Gene position: 2128642-2129802 (Clockwise)

Preceding gene: 119774873

Following gene: 119774875

Centisome position: 49.43

GC content: 51.08

Gene sequence:

>1161_bases
ATGCTGGAAATTCTGTTTCTGCTGCTGCCCATTGCCGCCGGATACGGTTGGTATATGGGACGTCGCAGTTTACGTCAGAA
CCAGTATCACCAACGTAAAAAGCTCAGCCGCGACTATTTCACCGGCCTGAATTACCTGCTCTCCAACGAATCGGACAAAG
CAGTAGACTTATTTATCAGTCTGCTGGATGTTGATGATGAAACCATAGACACCCACATGTCACTGGGCGCGTTGTTTCGT
AAGCGCGGTGAGGTCGACCGCTCTATCCGTATTCATCAAAATCTGATAGCCAGGCCCAGTTTAACCACGGAGCAGCGCGA
TGCGGCCATGATGGAGCTCGGCAAAGACTACATGGCGGCAGGGTTCTACGACAGGGCAGAAGAAATTTTCCTGGCATTGA
TTAAAGAAGAAGATCACAGTGAAGACGCTGAAAATCAGCTTATTGCCATCTATCAGATCATCAAGGAATGGCAAAAGGCC
ATTGATATCACCAAGGGCCTCTCCAAAAAGCGCCAGCAATCCTTAAAACCCATTGTCGCCCATTTCTACTGTCAGTTAGC
GGACGAAGCCAAAACCGCAGATGAAAAGCAAAAGCTTCTGAGCCAGGCGCTCAAGCAAGACCCAAACTGCGGCCGGGCGC
TATTGACTCTGGCTAAACTTCATCTTGATGAAGCGCGTCTGAACGACGCTGCCGCCATGCTGACCACACTCGCAGAGGTC
GATGTTTTGCTCTTTGCCGACGGAATCAAAATTGCCCGCCAGTTATACGCCGACCTCAATGATAAGGAAGGGTACCGCGA
ACTGCTGGCGCAAGCGCTCGCCAATGGCGGCGGCGCTTCAGTCGTGGTCGCGCTCGCCGAAGAAATGGTCGCCAGAGGTC
AGATAAAGATGGCTGAAAAAATGCTGCTGGATAACCTCTATCGTCAGCCCAGTATGAAAGGCTTTTCCGAGCTGATGAAG
CTGCATTTGGCCCAGGCCGAAGAAGGGCAGGCGAAAGAGAGTCTTTCTTTACTTGAACAATTGGTAGAACAACAAATAAA
ATTCCGTCCCGCCTATCGTTGTAAGTCCTGTGGCTTTCCGTCACACGCACTCTACTGGCATTGCCCTTCCTGTAAGTCCT
GGGGCAGTATTGCCCGGGTGAAAGGATTGGACGGCGAATAA

Upstream 100 bases:

>100_bases
TATGCGCTGTCCCGGGCCAACCGGAAATTACAGAAACTCGAGCCACAGACCGCGACCAATCCGGCTTCTCTGGTTTCTTC
GGGTGAAGTGAAGTCCTGAT

Downstream 100 bases:

>100_bases
CCCTAGTCCCACTGCATCGGAGATCCCATGAGAGACAAGCCCATTCTGGTTGCCCTTGATTTTGACAACAAGTATTCAGC
GTTGCAGTTGGTTGATAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MLEILFLLLPIAAGYGWYMGRRSLRQNQYHQRKKLSRDYFTGLNYLLSNESDKAVDLFISLLDVDDETIDTHMSLGALFR
KRGEVDRSIRIHQNLIARPSLTTEQRDAAMMELGKDYMAAGFYDRAEEIFLALIKEEDHSEDAENQLIAIYQIIKEWQKA
IDITKGLSKKRQQSLKPIVAHFYCQLADEAKTADEKQKLLSQALKQDPNCGRALLTLAKLHLDEARLNDAAAMLTTLAEV
DVLLFADGIKIARQLYADLNDKEGYRELLAQALANGGGASVVVALAEEMVARGQIKMAEKMLLDNLYRQPSMKGFSELMK
LHLAQAEEGQAKESLSLLEQLVEQQIKFRPAYRCKSCGFPSHALYWHCPSCKSWGSIARVKGLDGE

Sequences:

>Translated_386_residues
MLEILFLLLPIAAGYGWYMGRRSLRQNQYHQRKKLSRDYFTGLNYLLSNESDKAVDLFISLLDVDDETIDTHMSLGALFR
KRGEVDRSIRIHQNLIARPSLTTEQRDAAMMELGKDYMAAGFYDRAEEIFLALIKEEDHSEDAENQLIAIYQIIKEWQKA
IDITKGLSKKRQQSLKPIVAHFYCQLADEAKTADEKQKLLSQALKQDPNCGRALLTLAKLHLDEARLNDAAAMLTTLAEV
DVLLFADGIKIARQLYADLNDKEGYRELLAQALANGGGASVVVALAEEMVARGQIKMAEKMLLDNLYRQPSMKGFSELMK
LHLAQAEEGQAKESLSLLEQLVEQQIKFRPAYRCKSCGFPSHALYWHCPSCKSWGSIARVKGLDGE
>Mature_386_residues
MLEILFLLLPIAAGYGWYMGRRSLRQNQYHQRKKLSRDYFTGLNYLLSNESDKAVDLFISLLDVDDETIDTHMSLGALFR
KRGEVDRSIRIHQNLIARPSLTTEQRDAAMMELGKDYMAAGFYDRAEEIFLALIKEEDHSEDAENQLIAIYQIIKEWQKA
IDITKGLSKKRQQSLKPIVAHFYCQLADEAKTADEKQKLLSQALKQDPNCGRALLTLAKLHLDEARLNDAAAMLTTLAEV
DVLLFADGIKIARQLYADLNDKEGYRELLAQALANGGGASVVVALAEEMVARGQIKMAEKMLLDNLYRQPSMKGFSELMK
LHLAQAEEGQAKESLSLLEQLVEQQIKFRPAYRCKSCGFPSHALYWHCPSCKSWGSIARVKGLDGE

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=379, Percent_Identity=42.7440633245383, Blast_Score=328, Evalue=4e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43634; Mature: 43634

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEECCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure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CCCEEEECCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]