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The map label for this gene is gph [C]

Identifier: 119774864

GI number: 119774864

Start: 2116488

End: 2117129

Strand: Reverse

Name: gph [C]

Synonym: Sama_1729

Alternate gene names: 119774864

Gene position: 2117129-2116488 (Counterclockwise)

Preceding gene: 119774865

Following gene: 119774863

Centisome position: 49.17

GC content: 52.65

Gene sequence:

>642_bases
ATGGGCGGAGTGTTGTTTGACCTGGATGGTACCCTGGTAGATACAGCTCCTGATTTAGTGGCGGCACTCAACCTCGCTCT
GGCGGATTTTGGCTTCTCAAGGGCGGATCTGGACAGTATGCGCCCCGTTGCTTCCCATGGCAGCCTTGCCTTGGTAAAAG
CCGCTAAGCCAGATCTTGATGAGGATGTGGCCATACAGATCCAGCAGGCGCTTTTAGCGCACTACGGCAAGGTGAATGGC
ACCGAAGCGAAGCTCTTTCCCGGTATAAATCTGTTACTTGAACATTTAGAGAGCAGGCACATCCCCTGGGGCATAGTCAC
CAATAAAGCAGCCCGCTATGCAAGACCGCTATTGGACAGACTCGGTCTGGCACATCAGTGCTCCACGCTTATCAGTGGCG
ATACGGTCACCCGTGGGAAACCCGATGCAGCTCCCATGTTACTTGGCGCGTCACATCTTGGCCGGCATACTGAACACCTC
TTATATCTTGGGGATGCAAAACGTGACATGGAAGCGGCCCGTAATGCCGGCATGGTTTCAGTGCTGGCTTCCTGGGGTTA
TCTTTCATCACTCGATGAAGCCCATGATTGGCCAATCGATATACATTTGAAGCGACCTCAGGATTTGATTGCTCACCTTT
AA

Upstream 100 bases:

>100_bases
GTGACTTACAATCCCATCACGGGTACCTTCCGCTATACCAGCAGCGTTGAAGTTAACTACATGATTGCTACGGTAAAGCC
CCTTGAGTGAGCCTGTATCC

Downstream 100 bases:

>100_bases
GGCGGGTTTGACGCCGAGGACGCTGGCAGTGAGACTGTCAAGGGATCATGAATCGATCGCTTGCAAGATAAGCGATCGAT
TCGTTTCACTGACAGGGTCA

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MGGVLFDLDGTLVDTAPDLVAALNLALADFGFSRADLDSMRPVASHGSLALVKAAKPDLDEDVAIQIQQALLAHYGKVNG
TEAKLFPGINLLLEHLESRHIPWGIVTNKAARYARPLLDRLGLAHQCSTLISGDTVTRGKPDAAPMLLGASHLGRHTEHL
LYLGDAKRDMEAARNAGMVSVLASWGYLSSLDEAHDWPIDIHLKRPQDLIAHL

Sequences:

>Translated_213_residues
MGGVLFDLDGTLVDTAPDLVAALNLALADFGFSRADLDSMRPVASHGSLALVKAAKPDLDEDVAIQIQQALLAHYGKVNG
TEAKLFPGINLLLEHLESRHIPWGIVTNKAARYARPLLDRLGLAHQCSTLISGDTVTRGKPDAAPMLLGASHLGRHTEHL
LYLGDAKRDMEAARNAGMVSVLASWGYLSSLDEAHDWPIDIHLKRPQDLIAHL
>Mature_212_residues
GGVLFDLDGTLVDTAPDLVAALNLALADFGFSRADLDSMRPVASHGSLALVKAAKPDLDEDVAIQIQQALLAHYGKVNGT
EAKLFPGINLLLEHLESRHIPWGIVTNKAARYARPLLDRLGLAHQCSTLISGDTVTRGKPDAAPMLLGASHLGRHTEHLL
YLGDAKRDMEAARNAGMVSVLASWGYLSSLDEAHDWPIDIHLKRPQDLIAHL

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=206, Percent_Identity=34.4660194174757, Blast_Score=111, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 22986; Mature: 22854

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGVLFDLDGTLVDTAPDLVAALNLALADFGFSRADLDSMRPVASHGSLALVKAAKPDLD
CCCEEEECCCCEECCHHHHHHHHHHHHHHCCCCHHCHHHCCCCCCCCCEEEEECCCCCCC
EDVAIQIQQALLAHYGKVNGTEAKLFPGINLLLEHLESRHIPWGIVTNKAARYARPLLDR
HHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
LGLAHQCSTLISGDTVTRGKPDAAPMLLGASHLGRHTEHLLYLGDAKRDMEAARNAGMVS
HCHHHHHHHHHCCCCCCCCCCCCCHHHHCHHHHCCCCCEEEEECCCHHHHHHHHCCCHHH
VLASWGYLSSLDEAHDWPIDIHLKRPQDLIAHL
HHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCC
>Mature Secondary Structure 
GGVLFDLDGTLVDTAPDLVAALNLALADFGFSRADLDSMRPVASHGSLALVKAAKPDLD
CCEEEECCCCEECCHHHHHHHHHHHHHHCCCCHHCHHHCCCCCCCCCEEEEECCCCCCC
EDVAIQIQQALLAHYGKVNGTEAKLFPGINLLLEHLESRHIPWGIVTNKAARYARPLLDR
HHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
LGLAHQCSTLISGDTVTRGKPDAAPMLLGASHLGRHTEHLLYLGDAKRDMEAARNAGMVS
HCHHHHHHHHHCCCCCCCCCCCCCHHHHCHHHHCCCCCEEEEECCCHHHHHHHHCCCHHH
VLASWGYLSSLDEAHDWPIDIHLKRPQDLIAHL
HHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA