The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774817

Identifier: 119774817

GI number: 119774817

Start: 2055423

End: 2055644

Strand: Direct

Name: 119774817

Synonym: Sama_1681

Alternate gene names: NA

Gene position: 2055423-2055644 (Clockwise)

Preceding gene: 119774816

Following gene: 119774818

Centisome position: 47.73

GC content: 56.76

Gene sequence:

>222_bases
ATGAAGCGTCAAACCATGGCACGCATGCTTGCTGCCTTAACCCTGATGCTGCTGGCAGGTTGCACGGCGCTGCAGCCATG
GGAAAAGGGCGAGTTTGCCCGGGAAGATATGCAGCTTGGCGCCGAGGCATTGGATTTGTCGTTGGATGACCATGTGTATT
TCAGTAAAGAAGGTGCCAGCGGTGGCAGGAGCTTTGGCGGAGGCGGCTGCGGATGCAATTAG

Upstream 100 bases:

>100_bases
TTGACCGTTCGGGTAAACTCGTCGCGACCCACGTGGGCTTTTTCACCGAGAAGGCGGCTGAATATGAAGCCGAACTTGTG
ACTTTATTGGAGCAGCCAGA

Downstream 100 bases:

>100_bases
TGTCGACATCGCCAGATGACGGGTGTGTGGCTGAGCCAGCAGGGCAAACGCGTCTTTGCCAATCCGGTATTGCGGCGGCG
GTCTGCCTCTCAAGCCTTGC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MKRQTMARMLAALTLMLLAGCTALQPWEKGEFAREDMQLGAEALDLSLDDHVYFSKEGASGGRSFGGGGCGCN

Sequences:

>Translated_73_residues
MKRQTMARMLAALTLMLLAGCTALQPWEKGEFAREDMQLGAEALDLSLDDHVYFSKEGASGGRSFGGGGCGCN
>Mature_73_residues
MKRQTMARMLAALTLMLLAGCTALQPWEKGEFAREDMQLGAEALDLSLDDHVYFSKEGASGGRSFGGGGCGCN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7772; Mature: 7772

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
11.0 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
11.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQTMARMLAALTLMLLAGCTALQPWEKGEFAREDMQLGAEALDLSLDDHVYFSKEGAS
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHCCCCCCCEEECCCCCC
GGRSFGGGGCGCN
CCCCCCCCCCCCC
>Mature Secondary Structure
MKRQTMARMLAALTLMLLAGCTALQPWEKGEFAREDMQLGAEALDLSLDDHVYFSKEGAS
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHCCCCCCCEEECCCCCC
GGRSFGGGGCGCN
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA