Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774762

Identifier: 119774762

GI number: 119774762

Start: 1989511

End: 1990314

Strand: Reverse

Name: 119774762

Synonym: Sama_1625

Alternate gene names: NA

Gene position: 1990314-1989511 (Counterclockwise)

Preceding gene: 119774763

Following gene: 119774753

Centisome position: 46.22

GC content: 53.86

Gene sequence:

>804_bases
ATGCACACCCAGATTAATGAACTCTTCTCCAACCTTTGGCAGGACTATGTGTCAGTAACGCCCTCTGCACAGAAAATTCA
TGCCCTGCTTGGCTCGACTCAGCAGGATGACGTGCAAAACGACCATATCGCCCTGCGTACCTTTAATATCGAGAAGATTA
ACCTGGAAAAACTGGCCGCCCATTTTCTGGCCCTGGGCTATGTAGAGAGCGGCGAATACCACTTCGAAGCCAAAAAGCTC
TATGCCAAGCACTTCGAGCACCCGGATGCCACTCAGCCCAAGGTGTTTATCTCTGAGCTGCTGTTGGAAAAATGCTCTCC
TGAGCTGCAGGCCACAGTGCACAAGCTGGTCGAGCAAATCGATGCGGCCGCCGTGACTGCCGATAACTTCCTCTACTCAG
GTCGTCACTGGAGCATCGACCAGGCCACCTACGAAACTCTGCTCAAGGAAAGCGAGTACGCCGCCTGGGTTTCTGTGTGG
GGATTTCGCGCCAACCACTTCACCGTATCGGTAAATGCGCTGAAAAACTACGAAACCCTGGCCTCCGTGAATGATGCCCT
CAAGGCCGCAGGTTTTGCACTCAACACCTCCGGCGGTGAAATCAAGGGCAGCGAAGAGGTGAAGCTCAAGCAGTCTTCGA
CCCTCGCCGACGAAGCCGTGGTGGAATTCACTGATGGCAAGCGTATGGTGCCAAGCTGTTTTTATGAGTTTGCCCGCCGC
TTCCCATTAGAAGATGGCCGCCTGTACCCAGGCTTTGTGGCTGCCTCCGCTGACAAGATTTTTGAGAGCACCAACGCCCG
TTAA

Upstream 100 bases:

>100_bases
CCCCGTCTCCTCAGTGGAAGCCAGCAGCGTCAGCCTGCCTGCCAGTCTGAGCCCGGGCCTCAGTATTTAACACACCCTAC
TTTGTATCAGGATTAGTAAT

Downstream 100 bases:

>100_bases
GTCTTGATAAAAACCGACAGCCCGGCCAGAGCCGGGCTTTTTTATGGGCCTAAGCCGCTGTGTGACGCGCCTTTAAATCT
GCTGACAATAAAAAACCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MHTQINELFSNLWQDYVSVTPSAQKIHALLGSTQQDDVQNDHIALRTFNIEKINLEKLAAHFLALGYVESGEYHFEAKKL
YAKHFEHPDATQPKVFISELLLEKCSPELQATVHKLVEQIDAAAVTADNFLYSGRHWSIDQATYETLLKESEYAAWVSVW
GFRANHFTVSVNALKNYETLASVNDALKAAGFALNTSGGEIKGSEEVKLKQSSTLADEAVVEFTDGKRMVPSCFYEFARR
FPLEDGRLYPGFVAASADKIFESTNAR

Sequences:

>Translated_267_residues
MHTQINELFSNLWQDYVSVTPSAQKIHALLGSTQQDDVQNDHIALRTFNIEKINLEKLAAHFLALGYVESGEYHFEAKKL
YAKHFEHPDATQPKVFISELLLEKCSPELQATVHKLVEQIDAAAVTADNFLYSGRHWSIDQATYETLLKESEYAAWVSVW
GFRANHFTVSVNALKNYETLASVNDALKAAGFALNTSGGEIKGSEEVKLKQSSTLADEAVVEFTDGKRMVPSCFYEFARR
FPLEDGRLYPGFVAASADKIFESTNAR
>Mature_267_residues
MHTQINELFSNLWQDYVSVTPSAQKIHALLGSTQQDDVQNDHIALRTFNIEKINLEKLAAHFLALGYVESGEYHFEAKKL
YAKHFEHPDATQPKVFISELLLEKCSPELQATVHKLVEQIDAAAVTADNFLYSGRHWSIDQATYETLLKESEYAAWVSVW
GFRANHFTVSVNALKNYETLASVNDALKAAGFALNTSGGEIKGSEEVKLKQSSTLADEAVVEFTDGKRMVPSCFYEFARR
FPLEDGRLYPGFVAASADKIFESTNAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29947; Mature: 29947

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTQINELFSNLWQDYVSVTPSAQKIHALLGSTQQDDVQNDHIALRTFNIEKINLEKLAA
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCEECHHHHHH
HFLALGYVESGEYHFEAKKLYAKHFEHPDATQPKVFISELLLEKCSPELQATVHKLVEQI
HHHHHHCEECCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
DAAAVTADNFLYSGRHWSIDQATYETLLKESEYAAWVSVWGFRANHFTVSVNALKNYETL
HHHHEEHHHHEECCCCCCCHHHHHHHHHHHCHHHHHHHHHEEECCEEEEEEHHHHHHHHH
ASVNDALKAAGFALNTSGGEIKGSEEVKLKQSSTLADEAVVEFTDGKRMVPSCFYEFARR
HHHHHHHHHCCEEEECCCCCCCCCCCEEECHHCCHHHHHHEEECCCCCHHHHHHHHHHHH
FPLEDGRLYPGFVAASADKIFESTNAR
CCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHTQINELFSNLWQDYVSVTPSAQKIHALLGSTQQDDVQNDHIALRTFNIEKINLEKLAA
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCEECHHHHHH
HFLALGYVESGEYHFEAKKLYAKHFEHPDATQPKVFISELLLEKCSPELQATVHKLVEQI
HHHHHHCEECCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
DAAAVTADNFLYSGRHWSIDQATYETLLKESEYAAWVSVWGFRANHFTVSVNALKNYETL
HHHHEEHHHHEECCCCCCCHHHHHHHHHHHCHHHHHHHHHEEECCEEEEEEHHHHHHHHH
ASVNDALKAAGFALNTSGGEIKGSEEVKLKQSSTLADEAVVEFTDGKRMVPSCFYEFARR
HHHHHHHHHCCEEEECCCCCCCCCCCEEECHHCCHHHHHHEEECCCCCHHHHHHHHHHHH
FPLEDGRLYPGFVAASADKIFESTNAR
CCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA