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The map label for this gene is ytfM [H]

Identifier: 119774753

GI number: 119774753

Start: 1977395

End: 1979233

Strand: Reverse

Name: ytfM [H]

Synonym: Sama_1616

Alternate gene names: 119774753

Gene position: 1979233-1977395 (Counterclockwise)

Preceding gene: 119774762

Following gene: 119774752

Centisome position: 45.96

GC content: 53.89

Gene sequence:

>1839_bases
TTGAAAGTGAAATTTTTATATCCTCTGACAGCCGCAGCCCTGTTTGGCGCCCTGCCTGTCAGTGCAGCAAACGATCCTTT
ACTGCGGATAAATGTCAGCGGCGTAGATGAAGCGCTCGAAAAAAATATCCGTGCACACCTGGGTTCCCTGCCGGAGTCCG
AGGTACAAAGGCGTGCCTTCCTGTTTAATGTGCAGGACAGCGTTGACGCTGCTCTGCAATCAGTGGGCTATTACCACGGT
GAGCTCAACCAAAACCTCATTCGCCATGATAAAGGTCCGTGGGAGCTGACACTGACTGTCTCTCCCGGTGAGCCAACCCG
TATCGATTGGGTGGACATCCGCTTTGCCGGTGAAATGCTGAATGACGCCGCCTTTGACACCTGGCTTGATGGCGTCAGCC
TGAGGCCGGGTCAGGTGCTCAATCACGGCAACTATGAAAATCTTAAAGCCGAGCTTGGCGCCATCGCGCTGTCCCGGGGC
TACTTTGATGGCAAATACACCAAGGCAGAAATCCGGGTAAACCGCGATGAGAATCGCGCTACCATCAGCCTGCATTTTGA
TTCCAGCGCCCGATATCGCCTTGGCGATGTCAGCTTTGAGGGCCACACCCTGGATGAGGGCTTTCTGGATAGACTCATTC
CCTTTGAGCACCAAAGCCCTTATGCAACCCGTCGGCTGTCGGCGCTGAACAGCCGCTTGCAGGAGACCGGTTATTTTCGC
TCAACCAAGGTATTGCCACAGCTTGATAAGGCCGAGAACGGGGAAATTCCCATTAAAGTTGAACTGGATAATCGTCCGGA
TCATTCCATCGAGCTGGGTTTGGGTGGCGATATAGGCTCGAGCAGCGACAGTACCTTCGAGCCCAGGGTCAGGGTGACCT
GGCGCACGCCACAAATTAACAGCCACGGCCACTCTCAGGAAACCAGTATCGAGTGGTCGCCCGACCGTCCCAAATTTTTA
ACCACCTATACCATTCCCCTCACCCATCCGCTGGACGATCAATTAAAACTGAGACTCGGTCTGCTGCGGGATAAATACGG
CGTGACCCAGGTATATGAACCCGAAGATCTGGATTTCAGAAACACAGGTCAGTTGGAGTCCAGCAAGCAATTGCTGGGGG
TACTCAGGCAGCAGTCTCTGGGCGATGGCTGGTTGATGGGGTATTCGCTGGACTTTATCCGCGAGAGCTACACCCAGTTT
GATACCGATTATTCCCCGTCTTTCCTGCTGGCCGGATTTAGTCTGTCCAATACGGTCAGGGGGGATGCGACACTCGACCC
CAAGTGGGGTTACCGTCAGTCTTACAGTGTTGACTATGCCGACCCCAGCCTGGGCTCCGCCACGCGTTTAAGCCGCTTTC
AAGCCAAATTCAAATGGATTGACACCTTCTTTACCAAGCATCGCCTCGTCGCCAGAGCCGATTTTGGTCTGAACCTGGTG
AGCGATGGCGATCTGGCACTGGTGCCACCGTCCCTGAGGTATTTCACCGGCGGCGATCAGAGTATTCGCGGTTATGCATT
TCAGGAAATTGGTCCCTATATCGAGTTCACCAATGATGATGGGCAAATCGCCCGTGAAGTCATAGGTGGTCGCTACCTCG
CAGTCGGCAGCCTGGAATATCAATATTATCTGACGCCATCGTGGCGTTTGGGCTCCTTTGTTGATGCCGGTAACGCGTTT
GATAAGGACAAGTTTGAACCCGTGGTATCGGTTGGTGGCGGCGTACACTGGATTTCCCCCATAGGCCCAATCAAACTCGA
TTTGGGCGTAGGCCTGACCGAGACAGATACGCTGGAGCGCTCGTGGCGTATACACCTGACTATGGGAAGCGAACTATGA

Upstream 100 bases:

>100_bases
ATTTCGCGCGCCAAACACAATCCCGCCTTGCCGGGCATGCAGGATACAGCGACAATAAAAACCAATGGAGTAACAACTGC
AATCCGGGACTTTTGCGCCT

Downstream 100 bases:

>100_bases
GCCAGGATATGAATCAAACCACGCCGTCAATGGGTTCTGACTCCCCAAACACGCCCAAGCCGGTAACAAAGGTATTGCCT
TGGTACCACCCCTGGCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 612; Mature: 612

Protein sequence:

>612_residues
MKVKFLYPLTAAALFGALPVSAANDPLLRINVSGVDEALEKNIRAHLGSLPESEVQRRAFLFNVQDSVDAALQSVGYYHG
ELNQNLIRHDKGPWELTLTVSPGEPTRIDWVDIRFAGEMLNDAAFDTWLDGVSLRPGQVLNHGNYENLKAELGAIALSRG
YFDGKYTKAEIRVNRDENRATISLHFDSSARYRLGDVSFEGHTLDEGFLDRLIPFEHQSPYATRRLSALNSRLQETGYFR
STKVLPQLDKAENGEIPIKVELDNRPDHSIELGLGGDIGSSSDSTFEPRVRVTWRTPQINSHGHSQETSIEWSPDRPKFL
TTYTIPLTHPLDDQLKLRLGLLRDKYGVTQVYEPEDLDFRNTGQLESSKQLLGVLRQQSLGDGWLMGYSLDFIRESYTQF
DTDYSPSFLLAGFSLSNTVRGDATLDPKWGYRQSYSVDYADPSLGSATRLSRFQAKFKWIDTFFTKHRLVARADFGLNLV
SDGDLALVPPSLRYFTGGDQSIRGYAFQEIGPYIEFTNDDGQIAREVIGGRYLAVGSLEYQYYLTPSWRLGSFVDAGNAF
DKDKFEPVVSVGGGVHWISPIGPIKLDLGVGLTETDTLERSWRIHLTMGSEL

Sequences:

>Translated_612_residues
MKVKFLYPLTAAALFGALPVSAANDPLLRINVSGVDEALEKNIRAHLGSLPESEVQRRAFLFNVQDSVDAALQSVGYYHG
ELNQNLIRHDKGPWELTLTVSPGEPTRIDWVDIRFAGEMLNDAAFDTWLDGVSLRPGQVLNHGNYENLKAELGAIALSRG
YFDGKYTKAEIRVNRDENRATISLHFDSSARYRLGDVSFEGHTLDEGFLDRLIPFEHQSPYATRRLSALNSRLQETGYFR
STKVLPQLDKAENGEIPIKVELDNRPDHSIELGLGGDIGSSSDSTFEPRVRVTWRTPQINSHGHSQETSIEWSPDRPKFL
TTYTIPLTHPLDDQLKLRLGLLRDKYGVTQVYEPEDLDFRNTGQLESSKQLLGVLRQQSLGDGWLMGYSLDFIRESYTQF
DTDYSPSFLLAGFSLSNTVRGDATLDPKWGYRQSYSVDYADPSLGSATRLSRFQAKFKWIDTFFTKHRLVARADFGLNLV
SDGDLALVPPSLRYFTGGDQSIRGYAFQEIGPYIEFTNDDGQIAREVIGGRYLAVGSLEYQYYLTPSWRLGSFVDAGNAF
DKDKFEPVVSVGGGVHWISPIGPIKLDLGVGLTETDTLERSWRIHLTMGSEL
>Mature_612_residues
MKVKFLYPLTAAALFGALPVSAANDPLLRINVSGVDEALEKNIRAHLGSLPESEVQRRAFLFNVQDSVDAALQSVGYYHG
ELNQNLIRHDKGPWELTLTVSPGEPTRIDWVDIRFAGEMLNDAAFDTWLDGVSLRPGQVLNHGNYENLKAELGAIALSRG
YFDGKYTKAEIRVNRDENRATISLHFDSSARYRLGDVSFEGHTLDEGFLDRLIPFEHQSPYATRRLSALNSRLQETGYFR
STKVLPQLDKAENGEIPIKVELDNRPDHSIELGLGGDIGSSSDSTFEPRVRVTWRTPQINSHGHSQETSIEWSPDRPKFL
TTYTIPLTHPLDDQLKLRLGLLRDKYGVTQVYEPEDLDFRNTGQLESSKQLLGVLRQQSLGDGWLMGYSLDFIRESYTQF
DTDYSPSFLLAGFSLSNTVRGDATLDPKWGYRQSYSVDYADPSLGSATRLSRFQAKFKWIDTFFTKHRLVARADFGLNLV
SDGDLALVPPSLRYFTGGDQSIRGYAFQEIGPYIEFTNDDGQIAREVIGGRYLAVGSLEYQYYLTPSWRLGSFVDAGNAF
DKDKFEPVVSVGGGVHWISPIGPIKLDLGVGLTETDTLERSWRIHLTMGSEL

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=619, Percent_Identity=34.4103392568659, Blast_Score=311, Evalue=6e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 68662; Mature: 68662

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKFLYPLTAAALFGALPVSAANDPLLRINVSGVDEALEKNIRAHLGSLPESEVQRRAF
CEEEEECHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHEEE
LFNVQDSVDAALQSVGYYHGELNQNLIRHDKGPWELTLTVSPGEPTRIDWVDIRFAGEML
EEECHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCEEEEEEEEEHHHHH
NDAAFDTWLDGVSLRPGQVLNHGNYENLKAELGAIALSRGYFDGKYTKAEIRVNRDENRA
HHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHCEEEEECCCCCCCEEEEEEEEECCCCEE
TISLHFDSSARYRLGDVSFEGHTLDEGFLDRLIPFEHQSPYATRRLSALNSRLQETGYFR
EEEEEECCCCCEEEECEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
STKVLPQLDKAENGEIPIKVELDNRPDHSIELGLGGDIGSSSDSTFEPRVRVTWRTPQIN
CCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCC
SHGHSQETSIEWSPDRPKFLTTYTIPLTHPLDDQLKLRLGLLRDKYGVTQVYEPEDLDFR
CCCCCCCCEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCC
NTGQLESSKQLLGVLRQQSLGDGWLMGYSLDFIRESYTQFDTDYSPSFLLAGFSLSNTVR
CCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
GDATLDPKWGYRQSYSVDYADPSLGSATRLSRFQAKFKWIDTFFTKHRLVARADFGLNLV
CCCEECCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEE
SDGDLALVPPSLRYFTGGDQSIRGYAFQEIGPYIEFTNDDGQIAREVIGGRYLAVGSLEY
CCCCEEEECCCCEEEECCCCCCCCEEHHHCCCEEEEECCCHHHHHHHHCCEEEEEEEEEE
QYYLTPSWRLGSFVDAGNAFDKDKFEPVVSVGGGVHWISPIGPIKLDLGVGLTETDTLER
EEEECCCCCCCCEECCCCCCCCCCCCHHEECCCCEEEECCCCCEEEEECCCCCCCCCCCC
SWRIHLTMGSEL
EEEEEEEECCCC
>Mature Secondary Structure
MKVKFLYPLTAAALFGALPVSAANDPLLRINVSGVDEALEKNIRAHLGSLPESEVQRRAF
CEEEEECHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHEEE
LFNVQDSVDAALQSVGYYHGELNQNLIRHDKGPWELTLTVSPGEPTRIDWVDIRFAGEML
EEECHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCEEEEEEEEEHHHHH
NDAAFDTWLDGVSLRPGQVLNHGNYENLKAELGAIALSRGYFDGKYTKAEIRVNRDENRA
HHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHCEEEEECCCCCCCEEEEEEEEECCCCEE
TISLHFDSSARYRLGDVSFEGHTLDEGFLDRLIPFEHQSPYATRRLSALNSRLQETGYFR
EEEEEECCCCCEEEECEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
STKVLPQLDKAENGEIPIKVELDNRPDHSIELGLGGDIGSSSDSTFEPRVRVTWRTPQIN
CCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCC
SHGHSQETSIEWSPDRPKFLTTYTIPLTHPLDDQLKLRLGLLRDKYGVTQVYEPEDLDFR
CCCCCCCCEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCC
NTGQLESSKQLLGVLRQQSLGDGWLMGYSLDFIRESYTQFDTDYSPSFLLAGFSLSNTVR
CCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
GDATLDPKWGYRQSYSVDYADPSLGSATRLSRFQAKFKWIDTFFTKHRLVARADFGLNLV
CCCEECCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEE
SDGDLALVPPSLRYFTGGDQSIRGYAFQEIGPYIEFTNDDGQIAREVIGGRYLAVGSLEY
CCCCEEEECCCCEEEECCCCCCCCEEHHHCCCEEEEECCCHHHHHHHHCCEEEEEEEEEE
QYYLTPSWRLGSFVDAGNAFDKDKFEPVVSVGGGVHWISPIGPIKLDLGVGLTETDTLER
EEEECCCCCCCCEECCCCCCCCCCCCHHEECCCCEEEECCCCCEEEEECCCCCCCCCCCC
SWRIHLTMGSEL
EEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]