The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774740

Identifier: 119774740

GI number: 119774740

Start: 1959005

End: 1960882

Strand: Direct

Name: 119774740

Synonym: Sama_1603

Alternate gene names: NA

Gene position: 1959005-1960882 (Clockwise)

Preceding gene: 119774739

Following gene: 119774741

Centisome position: 45.49

GC content: 52.88

Gene sequence:

>1878_bases
ATGAAGTTACAGTTGGAAAAGGCATTGTCCCTGGTGGCTGTTGGTGTGCTCGGGGTACTTGGAAGTGCTCAGGCCGCGCC
GGTTTACGAAATTAAAAACCTCGAGAACTACGATCTTCGAGGCACCCTGGAAGGAACCCGCAACGGTTACGCCATGGGCG
TTAACGAAAATGATGAATTAGTGGGGATCTCCAAGGGCCGCAAGAAGCTGTCCACTGACGACGTCGAAGGCGGCATCATC
GACAGTGACGATGGGATTGCCGATGAAGAGCAGATCACCTATTCAGTGCTGCTGCCCATTGTGGCCAACAACTTTACCTT
CAGTGCGGCGGCAAATGGTGCCACCGGTGCCTGGGTGCCTACCTTTGAAAGCATCAATGGCACCACAGACCCCAAAGATA
CGGACACCAGTGTTCCTGAAACCATCAACTCCATTGATACCTTCTACTATGGTATTTCAGATGACGGTGTGAAAGTGGGG
GCCACCACTGCACCTCAGAAGACCCTCGAATATACCGGCAGCATCGAAGATCAGGAGTTTTGGTACTTCCGTGACTTCGA
GCTGCGTGGCGTTGCCAAAACGACCAGTGGTGATGTCGCTCTGCCACCGCCTTATGTGGAATACACCAGCACCAAAGAAG
GCGAATCGGACAAAAAGGTTTACGTGGGTGGAACGTCCGCGGCCACTGCGATATCGGGAAATTTAGTTACCGGTTATGCC
AGTACCGATATCAGTCGCTATGGCGGTGAGCGCGTACAGGCCTGTCTTGACAATGCCAGCACAGAAGGCGCATTGCCGGT
TGATGTATGTGTTCAGATTGAGCAATACCCCAACTCCACCGGTACCCGTAACGTTCAGTATCAGACCCGCGCCTATGTGT
GGCAGCTGGATAATGACACTGTGACAGGTACGGCCTTGCCATTGGGGCTTACTCCCGCTGCTGACTCAACCTTTACTTAC
ACAGCGCAGGGCCTTGGCATCAACGCCGAGGGAACTGTGGTGGGGCGCTCCCATGTGAACCGTAACGGCGATGAAGATTA
TTTCCGCATGGACGCCGCCTACTGGACTCGTAAACAGGATGGCAGTTATGACTATCACTGGGTACCAGTAATCAACGTAG
ATGACGTGCACAGTTCACTGGCCTACGATATCAACGATAACGGTATTTTGGTGGGCTCTTATCGCAGTTACATTCAGGGT
TATCTGCGTGACAAGTTCTTCTACCTGGATACCAAGGCGACCGATGCCAAGCCGGTTGTGCCGAACGATTTTTACAGCAC
ATTGTCGGATCTCTCCAGCCGCGCCAAGAGCATTAACAACAAGGGCCAGGTGGTTGGTTACATAGAAACCACCCACGAGA
AAGAAAAGCCACGTCCCAAGGCCGGTTTCCTGTTTGATATGAATGCCAAAGAGGGTGGGGAGTTCTCCAACCTCAACAAC
CTGCTGACCTGTGAGTCCAAAGGCTTCGAACAGGGCTCGGATGGCAACTGGCAACGTCATCAGGTTGAAGTGGTGGATGG
CAGCGGCAAAACCTTAACCTACAGCGCCGATATACAGGTTGTTGAAGCCAACAGCATCAATGAAGCCGGTGTGATTGTCG
GCACTGCTTTTGTGCGCAAGCCGGTTTATAAGGTCGACGAAAACGGTCTGCCCGTTGTCGAAAATGGCAAGTTTGTATTT
GAACTCGACGGTAACGGTAATCCTGTGACGTCTTACTTGCCGCGTGCCGTGGTGCTTGAGCCTGCAGGGACTGGTGCCAT
AGCTTGTACTGAGGTAGACGAAAACACGGGTGGCGAGAAATATGAGCGCCAGGGCGCCGCCAGTTTGTTCGCTTTGCTGT
TATTGCCTCTGGTTTGGCTCCGTCGCCGGGTACGCTAA

Upstream 100 bases:

>100_bases
ATTGCTGGGCGAAAAAGAACAGCAATTGGACGTTTACTTCGAGCGTTGGGAAGAACTCGAGTCAATGAAGTAAACCAATG
ATAATTATGGGAAGTTATTA

Downstream 100 bases:

>100_bases
AACCCGTAAAAAAAATGAGGGGCCGGTAGGCCCCTTTTTTCTTCACTGTCTCAATAGCTTAATATTTACTCGGTAAAATC
GAGTGTTTTTTTGATTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 625; Mature: 625

Protein sequence:

>625_residues
MKLQLEKALSLVAVGVLGVLGSAQAAPVYEIKNLENYDLRGTLEGTRNGYAMGVNENDELVGISKGRKKLSTDDVEGGII
DSDDGIADEEQITYSVLLPIVANNFTFSAAANGATGAWVPTFESINGTTDPKDTDTSVPETINSIDTFYYGISDDGVKVG
ATTAPQKTLEYTGSIEDQEFWYFRDFELRGVAKTTSGDVALPPPYVEYTSTKEGESDKKVYVGGTSAATAISGNLVTGYA
STDISRYGGERVQACLDNASTEGALPVDVCVQIEQYPNSTGTRNVQYQTRAYVWQLDNDTVTGTALPLGLTPAADSTFTY
TAQGLGINAEGTVVGRSHVNRNGDEDYFRMDAAYWTRKQDGSYDYHWVPVINVDDVHSSLAYDINDNGILVGSYRSYIQG
YLRDKFFYLDTKATDAKPVVPNDFYSTLSDLSSRAKSINNKGQVVGYIETTHEKEKPRPKAGFLFDMNAKEGGEFSNLNN
LLTCESKGFEQGSDGNWQRHQVEVVDGSGKTLTYSADIQVVEANSINEAGVIVGTAFVRKPVYKVDENGLPVVENGKFVF
ELDGNGNPVTSYLPRAVVLEPAGTGAIACTEVDENTGGEKYERQGAASLFALLLLPLVWLRRRVR

Sequences:

>Translated_625_residues
MKLQLEKALSLVAVGVLGVLGSAQAAPVYEIKNLENYDLRGTLEGTRNGYAMGVNENDELVGISKGRKKLSTDDVEGGII
DSDDGIADEEQITYSVLLPIVANNFTFSAAANGATGAWVPTFESINGTTDPKDTDTSVPETINSIDTFYYGISDDGVKVG
ATTAPQKTLEYTGSIEDQEFWYFRDFELRGVAKTTSGDVALPPPYVEYTSTKEGESDKKVYVGGTSAATAISGNLVTGYA
STDISRYGGERVQACLDNASTEGALPVDVCVQIEQYPNSTGTRNVQYQTRAYVWQLDNDTVTGTALPLGLTPAADSTFTY
TAQGLGINAEGTVVGRSHVNRNGDEDYFRMDAAYWTRKQDGSYDYHWVPVINVDDVHSSLAYDINDNGILVGSYRSYIQG
YLRDKFFYLDTKATDAKPVVPNDFYSTLSDLSSRAKSINNKGQVVGYIETTHEKEKPRPKAGFLFDMNAKEGGEFSNLNN
LLTCESKGFEQGSDGNWQRHQVEVVDGSGKTLTYSADIQVVEANSINEAGVIVGTAFVRKPVYKVDENGLPVVENGKFVF
ELDGNGNPVTSYLPRAVVLEPAGTGAIACTEVDENTGGEKYERQGAASLFALLLLPLVWLRRRVR
>Mature_625_residues
MKLQLEKALSLVAVGVLGVLGSAQAAPVYEIKNLENYDLRGTLEGTRNGYAMGVNENDELVGISKGRKKLSTDDVEGGII
DSDDGIADEEQITYSVLLPIVANNFTFSAAANGATGAWVPTFESINGTTDPKDTDTSVPETINSIDTFYYGISDDGVKVG
ATTAPQKTLEYTGSIEDQEFWYFRDFELRGVAKTTSGDVALPPPYVEYTSTKEGESDKKVYVGGTSAATAISGNLVTGYA
STDISRYGGERVQACLDNASTEGALPVDVCVQIEQYPNSTGTRNVQYQTRAYVWQLDNDTVTGTALPLGLTPAADSTFTY
TAQGLGINAEGTVVGRSHVNRNGDEDYFRMDAAYWTRKQDGSYDYHWVPVINVDDVHSSLAYDINDNGILVGSYRSYIQG
YLRDKFFYLDTKATDAKPVVPNDFYSTLSDLSSRAKSINNKGQVVGYIETTHEKEKPRPKAGFLFDMNAKEGGEFSNLNN
LLTCESKGFEQGSDGNWQRHQVEVVDGSGKTLTYSADIQVVEANSINEAGVIVGTAFVRKPVYKVDENGLPVVENGKFVF
ELDGNGNPVTSYLPRAVVLEPAGTGAIACTEVDENTGGEKYERQGAASLFALLLLPLVWLRRRVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67850; Mature: 67850

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQLEKALSLVAVGVLGVLGSAQAAPVYEIKNLENYDLRGTLEGTRNGYAMGVNENDEL
CCEEHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCEEEECCCCCCE
VGISKGRKKLSTDDVEGGIIDSDDGIADEEQITYSVLLPIVANNFTFSAAANGATGAWVP
EEECCCCCCCCCCCCCCCEEECCCCCCCCHHEEEEEEEEEHCCCEEEEECCCCCCCCCCC
TFESINGTTDPKDTDTSVPETINSIDTFYYGISDDGVKVGATTAPQKTLEYTGSIEDQEF
CHHCCCCCCCCCCCCCCCHHHHHCCEEEEEEECCCCEEECCCCCCCHHHHCCCCCCCCEE
WYFRDFELRGVAKTTSGDVALPPPYVEYTSTKEGESDKKVYVGGTSAATAISGNLVTGYA
EEEEEEEEEEEEECCCCCEECCCCCCEECCCCCCCCCCEEEEECCCCCEEECCCEEEEEE
STDISRYGGERVQACLDNASTEGALPVDVCVQIEQYPNSTGTRNVQYQTRAYVWQLDNDT
CCCHHHHCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEEEECCCE
VTGTALPLGLTPAADSTFTYTAQGLGINAEGTVVGRSHVNRNGDEDYFRMDAAYWTRKQD
EECEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEHHHCCCCCCCCCEEEEHHHEECCCC
GSYDYHWVPVINVDDVHSSLAYDINDNGILVGSYRSYIQGYLRDKFFYLDTKATDAKPVV
CCCCEEEEEEEEHHHCCCCEEEEECCCCEEEECHHHHHHHHHCCEEEEEECCCCCCCCCC
PNDFYSTLSDLSSRAKSINNKGQVVGYIETTHEKEKPRPKAGFLFDMNAKEGGEFSNLNN
CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
LLTCESKGFEQGSDGNWQRHQVEVVDGSGKTLTYSADIQVVEANSINEAGVIVGTAFVRK
EEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCEEEEECCCCCCCCEEEEEHHHHC
PVYKVDENGLPVVENGKFVFELDGNGNPVTSYLPRAVVLEPAGTGAIACTEVDENTGGEK
CCEEECCCCCCEEECCEEEEEECCCCCCHHHHCCCEEEEECCCCCEEEEEECCCCCCCHH
YERQGAASLFALLLLPLVWLRRRVR
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLQLEKALSLVAVGVLGVLGSAQAAPVYEIKNLENYDLRGTLEGTRNGYAMGVNENDEL
CCEEHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCEEEECCCCCCE
VGISKGRKKLSTDDVEGGIIDSDDGIADEEQITYSVLLPIVANNFTFSAAANGATGAWVP
EEECCCCCCCCCCCCCCCEEECCCCCCCCHHEEEEEEEEEHCCCEEEEECCCCCCCCCCC
TFESINGTTDPKDTDTSVPETINSIDTFYYGISDDGVKVGATTAPQKTLEYTGSIEDQEF
CHHCCCCCCCCCCCCCCCHHHHHCCEEEEEEECCCCEEECCCCCCCHHHHCCCCCCCCEE
WYFRDFELRGVAKTTSGDVALPPPYVEYTSTKEGESDKKVYVGGTSAATAISGNLVTGYA
EEEEEEEEEEEEECCCCCEECCCCCCEECCCCCCCCCCEEEEECCCCCEEECCCEEEEEE
STDISRYGGERVQACLDNASTEGALPVDVCVQIEQYPNSTGTRNVQYQTRAYVWQLDNDT
CCCHHHHCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEEEECCCE
VTGTALPLGLTPAADSTFTYTAQGLGINAEGTVVGRSHVNRNGDEDYFRMDAAYWTRKQD
EECEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEHHHCCCCCCCCCEEEEHHHEECCCC
GSYDYHWVPVINVDDVHSSLAYDINDNGILVGSYRSYIQGYLRDKFFYLDTKATDAKPVV
CCCCEEEEEEEEHHHCCCCEEEEECCCCEEEECHHHHHHHHHCCEEEEEECCCCCCCCCC
PNDFYSTLSDLSSRAKSINNKGQVVGYIETTHEKEKPRPKAGFLFDMNAKEGGEFSNLNN
CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
LLTCESKGFEQGSDGNWQRHQVEVVDGSGKTLTYSADIQVVEANSINEAGVIVGTAFVRK
EEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCEEEEECCCCCCCCEEEEEHHHHC
PVYKVDENGLPVVENGKFVFELDGNGNPVTSYLPRAVVLEPAGTGAIACTEVDENTGGEK
CCEEECCCCCCEEECCEEEEEECCCCCCHHHHCCCEEEEECCCCCEEEEEECCCCCCCHH
YERQGAASLFALLLLPLVWLRRRVR
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA