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The map label for this gene is yebR [H]

Identifier: 119774720

GI number: 119774720

Start: 1926749

End: 1927210

Strand: Direct

Name: yebR [H]

Synonym: Sama_1583

Alternate gene names: 119774720

Gene position: 1926749-1927210 (Clockwise)

Preceding gene: 119774719

Following gene: 119774721

Centisome position: 44.74

GC content: 54.55

Gene sequence:

>462_bases
ATGAAACACGCGTTTTACGACACCTTAAACCGCCAGGCTGAGGCCTTGCTGTCAGGCGAAGACGACCTGGTCGCCGCCAT
GGCTAACTTCTCGGCGCTTTTGAATGAACACATGGACGACCTGAATTGGGTCGGTTTCTATATTCGCCGTGAAGACACTT
TGGTGCTGGGCCCCTTCCAGGGCAAGGTTGCCTGCACCCGTATTCCATGGGGTAAGGGCGTATGCGGTACGGCCGCCGCC
ACGGATACAACACAGCGAGTCGCCGATGTGCATCAGTTTGACGGTCATATTGCCTGCGACTCAGCTTCTAACTCTGAAAT
TGTGGTGCCGGTAAGGCATCAGGGCAGGGTAATTGCAGTGCTCGATATCGACAGTCCCAGTTTTTCCCGCTTCGATGAGA
CAGATCAGGCAGGGCTTGAGACCTTGGTGAGAACCCTGGAAAAGGCCTTGTTCGGTCAATAA

Upstream 100 bases:

>100_bases
ATCCCTGCTGAAGGGCACGTCCCCCAACGTGGCGACGGCACCGGTAAAAAAAGCAGCTCGCAAGGCTGCAGAGAATGACT
GAATATCGGTAGGGAATTGC

Downstream 100 bases:

>100_bases
GTCACCAGTTTTCGTCAAATCCCAGTCGCATTCGCCCAAGCGGTCACTATAATAGGCTGCTTGTGCGTCTGCCTCGGGAT
CATTTCCCGGCGAATAGTAA

Product: GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKHAFYDTLNRQAEALLSGEDDLVAAMANFSALLNEHMDDLNWVGFYIRREDTLVLGPFQGKVACTRIPWGKGVCGTAAA
TDTTQRVADVHQFDGHIACDSASNSEIVVPVRHQGRVIAVLDIDSPSFSRFDETDQAGLETLVRTLEKALFGQ

Sequences:

>Translated_153_residues
MKHAFYDTLNRQAEALLSGEDDLVAAMANFSALLNEHMDDLNWVGFYIRREDTLVLGPFQGKVACTRIPWGKGVCGTAAA
TDTTQRVADVHQFDGHIACDSASNSEIVVPVRHQGRVIAVLDIDSPSFSRFDETDQAGLETLVRTLEKALFGQ
>Mature_153_residues
MKHAFYDTLNRQAEALLSGEDDLVAAMANFSALLNEHMDDLNWVGFYIRREDTLVLGPFQGKVACTRIPWGKGVCGTAAA
TDTTQRVADVHQFDGHIACDSASNSEIVVPVRHQGRVIAVLDIDSPSFSRFDETDQAGLETLVRTLEKALFGQ

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=149, Percent_Identity=59.0604026845638, Blast_Score=187, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6322781, Length=156, Percent_Identity=43.5897435897436, Blast_Score=130, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 16797; Mature: 16797

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHAFYDTLNRQAEALLSGEDDLVAAMANFSALLNEHMDDLNWVGFYIRREDTLVLGPFQ
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCC
GKVACTRIPWGKGVCGTAAATDTTQRVADVHQFDGHIACDSASNSEIVVPVRHQGRVIAV
CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCEEEE
LDIDSPSFSRFDETDQAGLETLVRTLEKALFGQ
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKHAFYDTLNRQAEALLSGEDDLVAAMANFSALLNEHMDDLNWVGFYIRREDTLVLGPFQ
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCC
GKVACTRIPWGKGVCGTAAATDTTQRVADVHQFDGHIACDSASNSEIVVPVRHQGRVIAV
CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCEEEE
LDIDSPSFSRFDETDQAGLETLVRTLEKALFGQ
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]