The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774708

Identifier: 119774708

GI number: 119774708

Start: 1915710

End: 1916504

Strand: Direct

Name: 119774708

Synonym: Sama_1571

Alternate gene names: NA

Gene position: 1915710-1916504 (Clockwise)

Preceding gene: 119774707

Following gene: 119774711

Centisome position: 44.49

GC content: 56.48

Gene sequence:

>795_bases
ATGATGAGACGTTGTCACGAAGTGGACTATGAAATTCGCGGCGAAAGCATGCAGCTGGTGGAAGTGGAGCTGGATCCCGG
TGAAACCGTAATTGCCGAGGCCGGTGCCATGACTTACATGGAAGAGGGCATTCAGTTTGAGGCCCGCATGGGTGATGGCT
CCCAGCCCGAATCCGGCTTTTTCGGCGCCCTGATGGGCGCTGGCAAGCGTATGCTTACCGGTGAGAGCCTGTTTATGACC
CACTTTACCAACCAGGGGCATGGTAAGCGTAGGGTGGCGTTTTCAGCACCTTACCCCGGTACCTTGCTGGCGCTGGATAT
GGCCGAGCTTGGCGGCGAGCTGATTTTGCAAAAAGACAGTTTCCTCGCAGCAGCCTTGGGAACCCAAATCACCATGACCT
TTAACAAGCGCCTGGGTACCGGTTTCTTTGGAGGTGAAGGTTTTATCATGCAAAAGCTCAAGGGTGATGGCATGGCCTTT
GTTCACGCCGGTGGCACCCTTATCAAGAAGGAACTCAAGGGCGAGACGTTGCGGGTGGATACCGGCTGTTTGGTGGGCTT
TACCCCCGGCATCGATTACGACATTCAGCGGGCCGGCTCGCTTAAGTCCATGGTATTTGGTGGTGAAGGTCTGTTTTTGG
CTACCCTCAGTGGTCATGGCACTGTGTGGCTGCAAAGCCTGCCATTCTCCCGTATGGCCGATCGTATTATCGCCCATGCG
CCGTCGGCGGGTGGTTCCAGCCGTGGTGAAGGTTCGGTGCTTGGCGGCCTTGGCCGCATGCTGGATGGCGATTGA

Upstream 100 bases:

>100_bases
ACTTGAGTTGTTGACACAGTTGTTTACATTTCGGCTCTGACAAATGACATATTATGTCGTATGTTGAGCCACATCCGTAA
AACGTCAGATGGGGAAAAGG

Downstream 100 bases:

>100_bases
TAAATTAGGCTGGCAGTATCTTTGCCTGCCACAGCTGACATTAATCATAAAAAGGGAGCCTTTGGCTCCCTTTTTTACAT
CACAATGATGAACAGCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MMRRCHEVDYEIRGESMQLVEVELDPGETVIAEAGAMTYMEEGIQFEARMGDGSQPESGFFGALMGAGKRMLTGESLFMT
HFTNQGHGKRRVAFSAPYPGTLLALDMAELGGELILQKDSFLAAALGTQITMTFNKRLGTGFFGGEGFIMQKLKGDGMAF
VHAGGTLIKKELKGETLRVDTGCLVGFTPGIDYDIQRAGSLKSMVFGGEGLFLATLSGHGTVWLQSLPFSRMADRIIAHA
PSAGGSSRGEGSVLGGLGRMLDGD

Sequences:

>Translated_264_residues
MMRRCHEVDYEIRGESMQLVEVELDPGETVIAEAGAMTYMEEGIQFEARMGDGSQPESGFFGALMGAGKRMLTGESLFMT
HFTNQGHGKRRVAFSAPYPGTLLALDMAELGGELILQKDSFLAAALGTQITMTFNKRLGTGFFGGEGFIMQKLKGDGMAF
VHAGGTLIKKELKGETLRVDTGCLVGFTPGIDYDIQRAGSLKSMVFGGEGLFLATLSGHGTVWLQSLPFSRMADRIIAHA
PSAGGSSRGEGSVLGGLGRMLDGD
>Mature_264_residues
MMRRCHEVDYEIRGESMQLVEVELDPGETVIAEAGAMTYMEEGIQFEARMGDGSQPESGFFGALMGAGKRMLTGESLFMT
HFTNQGHGKRRVAFSAPYPGTLLALDMAELGGELILQKDSFLAAALGTQITMTFNKRLGTGFFGGEGFIMQKLKGDGMAF
VHAGGTLIKKELKGETLRVDTGCLVGFTPGIDYDIQRAGSLKSMVFGGEGLFLATLSGHGTVWLQSLPFSRMADRIIAHA
PSAGGSSRGEGSVLGGLGRMLDGD

Specific function: Unknown

COG id: COG2013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002838
- InterPro:   IPR016031 [H]

Pfam domain/function: PF01987 DUF124 [H]

EC number: NA

Molecular weight: Translated: 28135; Mature: 28135

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRCHEVDYEIRGESMQLVEVELDPGETVIAEAGAMTYMEEGIQFEARMGDGSQPESGF
CCCCCHHCCEEECCCCEEEEEEEECCCCEEEECCCHHHHHHCCCEEEEECCCCCCCCCCC
FGALMGAGKRMLTGESLFMTHFTNQGHGKRRVAFSAPYPGTLLALDMAELGGELILQKDS
HHHHHHCCCEEECCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEHHHCCCEEEEECCC
FLAAALGTQITMTFNKRLGTGFFGGEGFIMQKLKGDGMAFVHAGGTLIKKELKGETLRVD
EEEEECCCEEEEEECCCCCCCEECCCCEEEEEECCCCEEEEECCCCEEHHHHCCCEEEEE
TGCLVGFTPGIDYDIQRAGSLKSMVFGGEGLFLATLSGHGTVWLQSLPFSRMADRIIAHA
CCEEEEECCCCCCCHHCCCCEEEEEECCCCEEEEEECCCCEEEEECCCHHHHHHHHHHCC
PSAGGSSRGEGSVLGGLGRMLDGD
CCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MMRRCHEVDYEIRGESMQLVEVELDPGETVIAEAGAMTYMEEGIQFEARMGDGSQPESGF
CCCCCHHCCEEECCCCEEEEEEEECCCCEEEECCCHHHHHHCCCEEEEECCCCCCCCCCC
FGALMGAGKRMLTGESLFMTHFTNQGHGKRRVAFSAPYPGTLLALDMAELGGELILQKDS
HHHHHHCCCEEECCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEHHHCCCEEEEECCC
FLAAALGTQITMTFNKRLGTGFFGGEGFIMQKLKGDGMAFVHAGGTLIKKELKGETLRVD
EEEEECCCEEEEEECCCCCCCEECCCCEEEEEECCCCEEEEECCCCEEHHHHCCCEEEEE
TGCLVGFTPGIDYDIQRAGSLKSMVFGGEGLFLATLSGHGTVWLQSLPFSRMADRIIAHA
CCEEEEECCCCCCCHHCCCCEEEEEECCCCEEEEEECCCCEEEEECCCHHHHHHHHHHCC
PSAGGSSRGEGSVLGGLGRMLDGD
CCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA