Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774485

Identifier: 119774485

GI number: 119774485

Start: 1638456

End: 1638986

Strand: Reverse

Name: 119774485

Synonym: Sama_1348

Alternate gene names: NA

Gene position: 1638986-1638456 (Counterclockwise)

Preceding gene: 119774486

Following gene: 119774484

Centisome position: 38.06

GC content: 38.42

Gene sequence:

>531_bases
ATGAGCCGAACAATTATCTTCGCTCTACTGATTTTTTCCGCATTAGAAGTAAAAGCCGAATGTAACTCATTACTGATAAA
CGGAATAACTAATGATTTGAAACTGACGTATGAGCAATTTGATCAAACGCCCGGTAAGGGTTGGCGGGTGTTAGAGAATA
AGAAATGCTACAGCGAAGCTGCCATTCTGATAGACAAATATATTCTTGAAAACAATGCTAACCAAACATCGCTTAAATCG
CATTTATTGCAAATGTACGCTTTTTCTGGTGAAAGTAGTAAAGCTCTTGAAATTGTTTCAGCTGTGCTGTTACCCGACGA
GCAGCAACGTAATTCGCCTTTTCTCTGGAACGATTATGTTTTGGCTACAGCTGGTTTTTTGGAAAAGGATCTTTCCAAAC
TAAAGTTTCATAGAGATAACGTTGCTAAGTACGGTAAGGGCTTTAAACCCAATGAAATGAACTTGGCAACTCTGGACAGG
TTAATTGAAAACTTTGACCAGACATATCAAATTGCATACATCGGTGGCTAA

Upstream 100 bases:

>100_bases
GCTAACAAGGCGCAGCACTCGCGGCCTGCGGCCGCTGGGATGCCAACCGCTACGCGGTCGTCCCCCGTGTGCTTTGCGTT
AGCACTAAAAGGATTTACGC

Downstream 100 bases:

>100_bases
GTGCTAACAATCGTCATCAAAACGCGCCCTTTGGGCGCTCGACTCGCAACACGTTGCTCGCGTTTGTGGCGGGCGTTATA
TTTCACGGAGGAATGGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSRTIIFALLIFSALEVKAECNSLLINGITNDLKLTYEQFDQTPGKGWRVLENKKCYSEAAILIDKYILENNANQTSLKS
HLLQMYAFSGESSKALEIVSAVLLPDEQQRNSPFLWNDYVLATAGFLEKDLSKLKFHRDNVAKYGKGFKPNEMNLATLDR
LIENFDQTYQIAYIGG

Sequences:

>Translated_176_residues
MSRTIIFALLIFSALEVKAECNSLLINGITNDLKLTYEQFDQTPGKGWRVLENKKCYSEAAILIDKYILENNANQTSLKS
HLLQMYAFSGESSKALEIVSAVLLPDEQQRNSPFLWNDYVLATAGFLEKDLSKLKFHRDNVAKYGKGFKPNEMNLATLDR
LIENFDQTYQIAYIGG
>Mature_175_residues
SRTIIFALLIFSALEVKAECNSLLINGITNDLKLTYEQFDQTPGKGWRVLENKKCYSEAAILIDKYILENNANQTSLKSH
LLQMYAFSGESSKALEIVSAVLLPDEQQRNSPFLWNDYVLATAGFLEKDLSKLKFHRDNVAKYGKGFKPNEMNLATLDRL
IENFDQTYQIAYIGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19983; Mature: 19852

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTIIFALLIFSALEVKAECNSLLINGITNDLKLTYEQFDQTPGKGWRVLENKKCYSEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCHHHHHH
AILIDKYILENNANQTSLKSHLLQMYAFSGESSKALEIVSAVLLPDEQQRNSPFLWNDYV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCCCCEECCHH
LATAGFLEKDLSKLKFHRDNVAKYGKGFKPNEMNLATLDRLIENFDQTYQIAYIGG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECC
>Mature Secondary Structure 
SRTIIFALLIFSALEVKAECNSLLINGITNDLKLTYEQFDQTPGKGWRVLENKKCYSEA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCHHHHHH
AILIDKYILENNANQTSLKSHLLQMYAFSGESSKALEIVSAVLLPDEQQRNSPFLWNDYV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCCCCEECCHH
LATAGFLEKDLSKLKFHRDNVAKYGKGFKPNEMNLATLDRLIENFDQTYQIAYIGG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA