The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774484

Identifier: 119774484

GI number: 119774484

Start: 1637911

End: 1638360

Strand: Reverse

Name: 119774484

Synonym: Sama_1347

Alternate gene names: NA

Gene position: 1638360-1637911 (Counterclockwise)

Preceding gene: 119774485

Following gene: 119774483

Centisome position: 38.05

GC content: 34.89

Gene sequence:

>450_bases
GTGCGTAGACTGCCTGCACTAATTTTAATTCTTATAATACCTTTTCAGGGTAGTGCTAGTTCCGATGTTAAAGAAATTCC
TTTATCTGAACTAACAGGTTTTGGTGTGCATGTTGCTCAGATGGGGATTAAAGAAAACCGAGCACATTCGTTCAATTTGC
TTTTTAGTGTTCCTAAAGTTGATAGCAATAATTGTAGTGTTTCTGATATTGAGCTAACTATTGAAAAAGATGGCCAGTTC
ATCGCTCACAATTTTCTTTCCAACATGTCAGAGTCAACAAAGGACTACTCAAGTCATATTATCGCGGCGAAAGCTGAAGG
ATTAATTTTTACCATTGGCGCTAGATACAGTTGTGAAAATCAAATTATGAACTCAATTTTTTATAGTTTTGGTGATTTGT
TAGAAATTGAAAAGCACTACACTGCCAATGGGTTATTAAGTGAAATATAA

Upstream 100 bases:

>100_bases
GCTAAGTGCTAACAATCGTCATCAAAACGCGCCCTTTGGGCGCTCGACTCGCAACACGTTGCTCGCGTTTGTGGCGGGCG
TTATATTTCACGGAGGAATG

Downstream 100 bases:

>100_bases
CAAGTTGCTAAATTTCGTTCCAGCCACAAACAGCGTGGCCTCCACGGGACAGCCTACACTGCGTTTCGGCTGCCCATTAG
CAAAGCGTTACATATAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRRLPALILILIIPFQGSASSDVKEIPLSELTGFGVHVAQMGIKENRAHSFNLLFSVPKVDSNNCSVSDIELTIEKDGQF
IAHNFLSNMSESTKDYSSHIIAAKAEGLIFTIGARYSCENQIMNSIFYSFGDLLEIEKHYTANGLLSEI

Sequences:

>Translated_149_residues
MRRLPALILILIIPFQGSASSDVKEIPLSELTGFGVHVAQMGIKENRAHSFNLLFSVPKVDSNNCSVSDIELTIEKDGQF
IAHNFLSNMSESTKDYSSHIIAAKAEGLIFTIGARYSCENQIMNSIFYSFGDLLEIEKHYTANGLLSEI
>Mature_149_residues
MRRLPALILILIIPFQGSASSDVKEIPLSELTGFGVHVAQMGIKENRAHSFNLLFSVPKVDSNNCSVSDIELTIEKDGQF
IAHNFLSNMSESTKDYSSHIIAAKAEGLIFTIGARYSCENQIMNSIFYSFGDLLEIEKHYTANGLLSEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16486; Mature: 16486

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLPALILILIIPFQGSASSDVKEIPLSELTGFGVHVAQMGIKENRAHSFNLLFSVPKV
CCCHHHEEEEEEECCCCCCCCCHHHCCHHHHCCCCHHHHHHCCCCCCCCEEEEEEEECCC
DSNNCSVSDIELTIEKDGQFIAHNFLSNMSESTKDYSSHIIAAKAEGLIFTIGARYSCEN
CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCHHH
QIMNSIFYSFGDLLEIEKHYTANGLLSEI
HHHHHHHHHHHHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure
MRRLPALILILIIPFQGSASSDVKEIPLSELTGFGVHVAQMGIKENRAHSFNLLFSVPKV
CCCHHHEEEEEEECCCCCCCCCHHHCCHHHHCCCCHHHHHHCCCCCCCCEEEEEEEECCC
DSNNCSVSDIELTIEKDGQFIAHNFLSNMSESTKDYSSHIIAAKAEGLIFTIGARYSCEN
CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCHHH
QIMNSIFYSFGDLLEIEKHYTANGLLSEI
HHHHHHHHHHHHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA