Click here to switch to the map view.

The map label for this gene is 119774482

Identifier: 119774482

GI number: 119774482

Start: 1636724

End: 1637206

Strand: Reverse

Name: 119774482

Synonym: Sama_1345

Alternate gene names: NA

Gene position: 1637206-1636724 (Counterclockwise)

Preceding gene: 119774483

Following gene: 119774481

Centisome position: 38.02

GC content: 39.75

Gene sequence:

>483_bases
ATGCGCTCGTTGAAGATACATTTAAGTATCCTTGTTTTTTTACTTAGCTTAGTTAGTTGTAAAACTAATCCAGTTAATGA
CTTAGAAGGCTCACTGAAACAATGCGAGCTAGTGGGCGAATTTGCGTACCTACATGCACTGAAAAAGCGACCGGAAAAAC
CAAAAAAAGACGACCCAGTCTCGGCTAAACAAGATATCTTGGTCGTAGCGACCAAAACAGATGACCGATACGAATCTTTG
GGTCAAGATACTAAACTAGAAGTACTAAAAATCATCGATGAAACAGATGTGTCCATGAACTTCTTAACCAGGGCAGTCAT
ATATCGAGTTTACTTTGAAACAGCATGTGAGGCTGAAGCTAAAGGCAAGCCGATAAGGCCATTCAACGAAATATACCAAA
GTGATTTTTTCTCGTGCTGGGATGATGGAAATGTATCTGAAAGTCTCACAAAGTGTATGCGTGAATATGTTTCAAGCCCC
TAA

Upstream 100 bases:

>100_bases
TCAAAGGGTTAATTAAAAAATATGTATAACAAGTTAAACCATCGGAAAACCACTCGCTACGCTCGCGTTTTCCGCTGTTT
AAAGCGTTAGGGGCATACGG

Downstream 100 bases:

>100_bases
CAAGCGCCATCAAAAACGCGCCCTTTGGGCGCTCGACTCGCAACACGTTGCTCGCGTTTGTGGCGGGCGTTAGGCATTTA
AAAGGACGTTAAGTGAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRSLKIHLSILVFLLSLVSCKTNPVNDLEGSLKQCELVGEFAYLHALKKRPEKPKKDDPVSAKQDILVVATKTDDRYESL
GQDTKLEVLKIIDETDVSMNFLTRAVIYRVYFETACEAEAKGKPIRPFNEIYQSDFFSCWDDGNVSESLTKCMREYVSSP

Sequences:

>Translated_160_residues
MRSLKIHLSILVFLLSLVSCKTNPVNDLEGSLKQCELVGEFAYLHALKKRPEKPKKDDPVSAKQDILVVATKTDDRYESL
GQDTKLEVLKIIDETDVSMNFLTRAVIYRVYFETACEAEAKGKPIRPFNEIYQSDFFSCWDDGNVSESLTKCMREYVSSP
>Mature_160_residues
MRSLKIHLSILVFLLSLVSCKTNPVNDLEGSLKQCELVGEFAYLHALKKRPEKPKKDDPVSAKQDILVVATKTDDRYESL
GQDTKLEVLKIIDETDVSMNFLTRAVIYRVYFETACEAEAKGKPIRPFNEIYQSDFFSCWDDGNVSESLTKCMREYVSSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18235; Mature: 18235

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLKIHLSILVFLLSLVSCKTNPVNDLEGSLKQCELVGEFAYLHALKKRPEKPKKDDPV
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SAKQDILVVATKTDDRYESLGQDTKLEVLKIIDETDVSMNFLTRAVIYRVYFETACEAEA
CCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
KGKPIRPFNEIYQSDFFSCWDDGNVSESLTKCMREYVSSP
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSLKIHLSILVFLLSLVSCKTNPVNDLEGSLKQCELVGEFAYLHALKKRPEKPKKDDPV
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SAKQDILVVATKTDDRYESLGQDTKLEVLKIIDETDVSMNFLTRAVIYRVYFETACEAEA
CCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
KGKPIRPFNEIYQSDFFSCWDDGNVSESLTKCMREYVSSP
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA