The gene/protein map for NC_010645 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774481

Identifier: 119774481

GI number: 119774481

Start: 1636239

End: 1636631

Strand: Reverse

Name: 119774481

Synonym: Sama_1344

Alternate gene names: NA

Gene position: 1636631-1636239 (Counterclockwise)

Preceding gene: 119774482

Following gene: 119774480

Centisome position: 38.01

GC content: 38.68

Gene sequence:

>393_bases
GTGAACTGGGCACGAATTGCTAAATACACATTCTTCTACTTTATCTGTTCCGTAGCTTCAGGCGTGCCATTGGGCTATGT
AATGGGGCGCTATGATTCAACTGGTGAAATGATTCCGAGCTCAATTTACTGGAGCTTTATTTTCCTTTCTATGGTTGTTG
AGGCAACGATCATTTATTTTCTAGTGAAGAACCAGAAAAAATTAGCTTTTATACATGCACTTATAGTTGTTTTGTTCAGC
TCTTTAATTGCGTCATGTATTCTGTATTTGTTGACTGGCGAGGTTCTTTTGGACGGCTGGCAAATTGATTATGTATGTAT
GTTTATTGCGCTTTTGTTTGGTGTTGCCTTAGGCAAGCATGCAACAAAAAGTTCAGGTGTTGTAAATGCCTAA

Upstream 100 bases:

>100_bases
GCCCCTAACAAGCGCCATCAAAAACGCGCCCTTTGGGCGCTCGACTCGCAACACGTTGCTCGCGTTTGTGGCGGGCGTTA
GGCATTTAAAAGGACGTTAA

Downstream 100 bases:

>100_bases
CAAGCGCCATCAAAAACGCGCCCGTTGGGCGCTCGACTCGCAACAAGTTGCTCGCCTTTGCTGCGGGCGTTAGGCTTTGA
ATGGAATCAGATTATGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MNWARIAKYTFFYFICSVASGVPLGYVMGRYDSTGEMIPSSIYWSFIFLSMVVEATIIYFLVKNQKKLAFIHALIVVLFS
SLIASCILYLLTGEVLLDGWQIDYVCMFIALLFGVALGKHATKSSGVVNA

Sequences:

>Translated_130_residues
MNWARIAKYTFFYFICSVASGVPLGYVMGRYDSTGEMIPSSIYWSFIFLSMVVEATIIYFLVKNQKKLAFIHALIVVLFS
SLIASCILYLLTGEVLLDGWQIDYVCMFIALLFGVALGKHATKSSGVVNA
>Mature_130_residues
MNWARIAKYTFFYFICSVASGVPLGYVMGRYDSTGEMIPSSIYWSFIFLSMVVEATIIYFLVKNQKKLAFIHALIVVLFS
SLIASCILYLLTGEVLLDGWQIDYVCMFIALLFGVALGKHATKSSGVVNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14503; Mature: 14503

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWARIAKYTFFYFICSVASGVPLGYVMGRYDSTGEMIPSSIYWSFIFLSMVVEATIIYF
CCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LVKNQKKLAFIHALIVVLFSSLIASCILYLLTGEVLLDGWQIDYVCMFIALLFGVALGKH
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
ATKSSGVVNA
CCCCCCCCCC
>Mature Secondary Structure
MNWARIAKYTFFYFICSVASGVPLGYVMGRYDSTGEMIPSSIYWSFIFLSMVVEATIIYF
CCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LVKNQKKLAFIHALIVVLFSSLIASCILYLLTGEVLLDGWQIDYVCMFIALLFGVALGKH
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
ATKSSGVVNA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA