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The map label for this gene is yehT [C]

Identifier: 119774418

GI number: 119774418

Start: 1570536

End: 1571246

Strand: Reverse

Name: yehT [C]

Synonym: Sama_1281

Alternate gene names: 119774418

Gene position: 1571246-1570536 (Counterclockwise)

Preceding gene: 119774419

Following gene: 119774417

Centisome position: 36.49

GC content: 53.59

Gene sequence:

>711_bases
ATGATCTCATGCATTCTGGTGGATGATGAGCCCTTCGCCAGGGAGGCCCTGGCCGAGCTATTGGTACGCCATCCAGATGT
GAATATCGTGGCACAGGCCAGTAACGCCATCGAAGCCATACAGGCGATAAACCAGCATAAGCCGGCTTTGTTGTTTTTGG
ATATTCAGATGCCACGCATCAGCGGAATGGAACTCCTGGCGATGCTCGATAAAGACACTATGCCCCGGGTAGTGTTTGTT
ACCGCATTTGATGAATACGCTATCAAAGCGTTTGAACTGCATGCCTTTGATTACCTGCTCAAACCCATCGATGATGCCCG
ACTGGCGAACACCATGGACAGGGTGCGAAAAGACCAGCGGCCACAGGATGTCACATCGCTTGCTCCCGAGCGCCTCGCTC
ATCTTCCCTGCTTCAGCGGTAATCGTCTGAAAGTGGTTCCGATTGAAGAGGTTGAGTATGTGTTCAGCGATGTCGGCGGC
ATCCATGTATCGACGGCCAATGGCAGGGTGCACACCCAAATGACCCTCAAACTGCTGGAAGAAAAAACCCCGCTGATATT
CTGCCATCGCCAATATCTGATAGCCCCGGCGGCCATCGCAGAAATCGTACTGCTTGATGGCGGAGCCGAGGTGGTTACCC
GCAGCGGGGCCCGGGTACCGGTTTCCCGCCGTTATCTTAAGGAACTTAAATCCCACTTCGGCTTCCTGTAA

Upstream 100 bases:

>100_bases
CGGTTGAATGCGAACCCGATACGCTCACCCGGGTCAGAATTTGCCTGCCAATCAACGTCGACACACCCATCGACACCGAC
AATTCGGGAGACAAGCCGAG

Downstream 100 bases:

>100_bases
ACCGCTCAAGTCTGATAACAACCGCTTAACCTGCCAAATCGACCGTTCACCCAAAAGACTGAGACACTGGACATCCCCTT
TCGTAGACTGGCACTACTCA

Product: putative two-component response-regulatory protein YehT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MISCILVDDEPFAREALAELLVRHPDVNIVAQASNAIEAIQAINQHKPALLFLDIQMPRISGMELLAMLDKDTMPRVVFV
TAFDEYAIKAFELHAFDYLLKPIDDARLANTMDRVRKDQRPQDVTSLAPERLAHLPCFSGNRLKVVPIEEVEYVFSDVGG
IHVSTANGRVHTQMTLKLLEEKTPLIFCHRQYLIAPAAIAEIVLLDGGAEVVTRSGARVPVSRRYLKELKSHFGFL

Sequences:

>Translated_236_residues
MISCILVDDEPFAREALAELLVRHPDVNIVAQASNAIEAIQAINQHKPALLFLDIQMPRISGMELLAMLDKDTMPRVVFV
TAFDEYAIKAFELHAFDYLLKPIDDARLANTMDRVRKDQRPQDVTSLAPERLAHLPCFSGNRLKVVPIEEVEYVFSDVGG
IHVSTANGRVHTQMTLKLLEEKTPLIFCHRQYLIAPAAIAEIVLLDGGAEVVTRSGARVPVSRRYLKELKSHFGFL
>Mature_236_residues
MISCILVDDEPFAREALAELLVRHPDVNIVAQASNAIEAIQAINQHKPALLFLDIQMPRISGMELLAMLDKDTMPRVVFV
TAFDEYAIKAFELHAFDYLLKPIDDARLANTMDRVRKDQRPQDVTSLAPERLAHLPCFSGNRLKVVPIEEVEYVFSDVGG
IHVSTANGRVHTQMTLKLLEEKTPLIFCHRQYLIAPAAIAEIVLLDGGAEVVTRSGARVPVSRRYLKELKSHFGFL

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=240, Percent_Identity=51.25, Blast_Score=239, Evalue=2e-64,
Organism=Escherichia coli, GI1788724, Length=240, Percent_Identity=25.4166666666667, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788192, Length=173, Percent_Identity=31.7919075144509, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 26455; Mature: 26455

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISCILVDDEPFAREALAELLVRHPDVNIVAQASNAIEAIQAINQHKPALLFLDIQMPRI
CEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCEEEEEEEECCCC
SGMELLAMLDKDTMPRVVFVTAFDEYAIKAFELHAFDYLLKPIDDARLANTMDRVRKDQR
CCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PQDVTSLAPERLAHLPCFSGNRLKVVPIEEVEYVFSDVGGIHVSTANGRVHTQMTLKLLE
CCHHHHHCHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCEEEEECCCEEEHHHHHHHHH
EKTPLIFCHRQYLIAPAAIAEIVLLDGGAEVVTRSGARVPVSRRYLKELKSHFGFL
CCCCEEEEEHHHHHHHHHHEEEEEECCCHHHEECCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MISCILVDDEPFAREALAELLVRHPDVNIVAQASNAIEAIQAINQHKPALLFLDIQMPRI
CEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCEEEEEEEECCCC
SGMELLAMLDKDTMPRVVFVTAFDEYAIKAFELHAFDYLLKPIDDARLANTMDRVRKDQR
CCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PQDVTSLAPERLAHLPCFSGNRLKVVPIEEVEYVFSDVGGIHVSTANGRVHTQMTLKLLE
CCHHHHHCHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCEEEEECCCEEEHHHHHHHHH
EKTPLIFCHRQYLIAPAAIAEIVLLDGGAEVVTRSGARVPVSRRYLKELKSHFGFL
CCCCEEEEEHHHHHHHHHHEEEEEECCCHHHEECCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]