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The map label for this gene is yjiY [C]

Identifier: 119774417

GI number: 119774417

Start: 1568982

End: 1570415

Strand: Reverse

Name: yjiY [C]

Synonym: Sama_1280

Alternate gene names: 119774417

Gene position: 1570415-1568982 (Counterclockwise)

Preceding gene: 119774418

Following gene: 119774416

Centisome position: 36.47

GC content: 54.81

Gene sequence:

>1434_bases
ATGACTTGGTTTTTACTCTGTGTCGGCCTGCTTCTCGTCGGCTACTTTGTTTACGGCGCCTTCGTCGAGAAGGTATTCGG
AATTAACGCCAAACGGCAAACCCCGGCGTTTGCCCAAACCGATGGCGTGGACTATGTGCCCATGTCCAAAGGCAAGGTCT
ATCTGATCCAACTGCTGAATATCGCCGGTGTCGGCCCCATCTTCGGCCCGATCCTCGGTGCCCTATACGGCCCAGCCGCC
ATGTTGTGGATTGTGATTGGCTGTATTTTTGCCGGTGCGGTACACGACTACTTCTCCGGTATGCTGTCGGTGCGAAACGG
TGGCCAGTCTGTGCCCAACCTTGCCGGTAAATACCTGGGTAAAAGTGCTAAACACTTTATGAACGTGTTTGCCACCATTC
TGCTGCTGCTCGTGGGTGTGGTATTTATTTCCGCTCCAGCGGGCCTGCTTGGAAAACTCACTGGCCTTAGCGTCAGCCTG
TTTGTGGGCATCATTTTCGTTTACTACCTGATTGCGACCATTGTGCCGGTAGACAAAATCATCGGTCGTCTGTACCCCTT
CTTCGGCGCCCTGTTGCTGTTTATGTCTGTGGGTCTGACTGTGGCACTCATCGTCTCTTCTGAGCACAGCTTGCTGCCCG
GTGTTGAAGCCTCTGATTTCCTCACCAACCTCAACCCCAATGACATGCCACTGTGGCCTGCTCTCTTTATCACCATCGCC
TGCGGCGCCGTATCTGGCTTCCACGCCACTCAGTCTCCCCTGATGGCACGCTGCATGGAAAACGAAACCAATGGCCGCTT
TGTGTTTTACGGCGCCATGATTGGTGAAGGCATCATCGCCCTTATTTGGTGTGCCATTGCCCTGTCGTTCTTCGGAGGTG
TTGAAGGCCTGGCAACCGGTATGGCCGGTAACCCTGCCAACGTGGTGTACGAAGCGTCTACCGGCCTGCTGGGTGCAGTG
GGTGGCTTTATGGCGGTGCTTGGAGTGATTATTCTGCCCATTACCTCTGGTGATACTGCATTCCGTTCAGCGCGTCTTAT
CCTGGCTGAATTCTTCAACATGCCACAAACCCAACTGCCTAAGCGATTGATGCTGGCCATCCCGCTGTTCGTGCTGGGCG
GCATACTGACTCAGGTCGATTTCGGTGTGATCTGGCGTTACTTCGGTGTGGCTAACCAGGCAACAGCCGTGCTGATGCTG
TGGACTGCCTCAGCCTATCTGCTGCGCCACAACAAGCTGCACTGGATTTGCACCATTCCGGCCATGTTCATGACCTCAGT
GGTAGTGACCTTCCTGCTGAACTCCGCAACCCTGGGTGCAGGCCTGCCAATGACCATCTCCACGGTCGTGGGTGTGCTGG
TCGCCTTCGCAGTGGCTACGCTGCTGGTGATTAAAATCAAGGGTAAATCGGTGGAACTGGCTGAAGAAGCCTAA

Upstream 100 bases:

>100_bases
ACCGCTTAACCTGCCAAATCGACCGTTCACCCAAAAGACTGAGACACTGGACATCCCCTTTCGTAGACTGGCACTACTCA
AAAAAGGGGAGATCCTCAAC

Downstream 100 bases:

>100_bases
TCCCCCCCCCCGGGTAACTCATACTCACTGAAAGGCCGGCGTTCGCCGGCCTTTGTTTTTTATCCATTCGGCAGGTTACA
ATGCCTCCCCCAATCGCCTT

Product: carbon starvation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MTWFLLCVGLLLVGYFVYGAFVEKVFGINAKRQTPAFAQTDGVDYVPMSKGKVYLIQLLNIAGVGPIFGPILGALYGPAA
MLWIVIGCIFAGAVHDYFSGMLSVRNGGQSVPNLAGKYLGKSAKHFMNVFATILLLLVGVVFISAPAGLLGKLTGLSVSL
FVGIIFVYYLIATIVPVDKIIGRLYPFFGALLLFMSVGLTVALIVSSEHSLLPGVEASDFLTNLNPNDMPLWPALFITIA
CGAVSGFHATQSPLMARCMENETNGRFVFYGAMIGEGIIALIWCAIALSFFGGVEGLATGMAGNPANVVYEASTGLLGAV
GGFMAVLGVIILPITSGDTAFRSARLILAEFFNMPQTQLPKRLMLAIPLFVLGGILTQVDFGVIWRYFGVANQATAVLML
WTASAYLLRHNKLHWICTIPAMFMTSVVVTFLLNSATLGAGLPMTISTVVGVLVAFAVATLLVIKIKGKSVELAEEA

Sequences:

>Translated_477_residues
MTWFLLCVGLLLVGYFVYGAFVEKVFGINAKRQTPAFAQTDGVDYVPMSKGKVYLIQLLNIAGVGPIFGPILGALYGPAA
MLWIVIGCIFAGAVHDYFSGMLSVRNGGQSVPNLAGKYLGKSAKHFMNVFATILLLLVGVVFISAPAGLLGKLTGLSVSL
FVGIIFVYYLIATIVPVDKIIGRLYPFFGALLLFMSVGLTVALIVSSEHSLLPGVEASDFLTNLNPNDMPLWPALFITIA
CGAVSGFHATQSPLMARCMENETNGRFVFYGAMIGEGIIALIWCAIALSFFGGVEGLATGMAGNPANVVYEASTGLLGAV
GGFMAVLGVIILPITSGDTAFRSARLILAEFFNMPQTQLPKRLMLAIPLFVLGGILTQVDFGVIWRYFGVANQATAVLML
WTASAYLLRHNKLHWICTIPAMFMTSVVVTFLLNSATLGAGLPMTISTVVGVLVAFAVATLLVIKIKGKSVELAEEA
>Mature_476_residues
TWFLLCVGLLLVGYFVYGAFVEKVFGINAKRQTPAFAQTDGVDYVPMSKGKVYLIQLLNIAGVGPIFGPILGALYGPAAM
LWIVIGCIFAGAVHDYFSGMLSVRNGGQSVPNLAGKYLGKSAKHFMNVFATILLLLVGVVFISAPAGLLGKLTGLSVSLF
VGIIFVYYLIATIVPVDKIIGRLYPFFGALLLFMSVGLTVALIVSSEHSLLPGVEASDFLTNLNPNDMPLWPALFITIAC
GAVSGFHATQSPLMARCMENETNGRFVFYGAMIGEGIIALIWCAIALSFFGGVEGLATGMAGNPANVVYEASTGLLGAVG
GFMAVLGVIILPITSGDTAFRSARLILAEFFNMPQTQLPKRLMLAIPLFVLGGILTQVDFGVIWRYFGVANQATAVLMLW
TASAYLLRHNKLHWICTIPAMFMTSVVVTFLLNSATLGAGLPMTISTVVGVLVAFAVATLLVIKIKGKSVELAEEA

Specific function: Unknown

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI87082431, Length=337, Percent_Identity=29.3768545994065, Blast_Score=111, Evalue=8e-26,
Organism=Escherichia coli, GI1786814, Length=337, Percent_Identity=29.3768545994065, Blast_Score=105, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 50708; Mature: 50577

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWFLLCVGLLLVGYFVYGAFVEKVFGINAKRQTPAFAQTDGVDYVPMSKGKVYLIQLLN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCEEHHHHHH
IAGVGPIFGPILGALYGPAAMLWIVIGCIFAGAVHDYFSGMLSVRNGGQSVPNLAGKYLG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
KSAKHFMNVFATILLLLVGVVFISAPAGLLGKLTGLSVSLFVGIIFVYYLIATIVPVDKI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGRLYPFFGALLLFMSVGLTVALIVSSEHSLLPGVEASDFLTNLNPNDMPLWPALFITIA
HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHH
CGAVSGFHATQSPLMARCMENETNGRFVFYGAMIGEGIIALIWCAIALSFFGGVEGLATG
HHHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
MAGNPANVVYEASTGLLGAVGGFMAVLGVIILPITSGDTAFRSARLILAEFFNMPQTQLP
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCHHHHH
KRLMLAIPLFVLGGILTQVDFGVIWRYFGVANQATAVLMLWTASAYLLRHNKLHWICTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECH
AMFMTSVVVTFLLNSATLGAGLPMTISTVVGVLVAFAVATLLVIKIKGKSVELAEEA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
>Mature Secondary Structure 
TWFLLCVGLLLVGYFVYGAFVEKVFGINAKRQTPAFAQTDGVDYVPMSKGKVYLIQLLN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCEEHHHHHH
IAGVGPIFGPILGALYGPAAMLWIVIGCIFAGAVHDYFSGMLSVRNGGQSVPNLAGKYLG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
KSAKHFMNVFATILLLLVGVVFISAPAGLLGKLTGLSVSLFVGIIFVYYLIATIVPVDKI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGRLYPFFGALLLFMSVGLTVALIVSSEHSLLPGVEASDFLTNLNPNDMPLWPALFITIA
HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHH
CGAVSGFHATQSPLMARCMENETNGRFVFYGAMIGEGIIALIWCAIALSFFGGVEGLATG
HHHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
MAGNPANVVYEASTGLLGAVGGFMAVLGVIILPITSGDTAFRSARLILAEFFNMPQTQLP
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCHHHHH
KRLMLAIPLFVLGGILTQVDFGVIWRYFGVANQATAVLMLWTASAYLLRHNKLHWICTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECH
AMFMTSVVVTFLLNSATLGAGLPMTISTVVGVLVAFAVATLLVIKIKGKSVELAEEA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]