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The map label for this gene is 119774390

Identifier: 119774390

GI number: 119774390

Start: 1540648

End: 1542429

Strand: Direct

Name: 119774390

Synonym: Sama_1253

Alternate gene names: NA

Gene position: 1540648-1542429 (Clockwise)

Preceding gene: 119774389

Following gene: 119774391

Centisome position: 35.78

GC content: 46.91

Gene sequence:

>1782_bases
ATGAATACGCAACAGGTGTTTATCTCTGGAGTGCAACTCTTTCAGGCTGGAAATTTCGCTGGGGCTAGCCAGTGTTTTTC
AACGGTCGTGCAGCAGATCCCGCACCATTTGGATGCGCACTTCCTATTGGCGCAGTGTCGCCGAAAGCTGAACGACCCGG
ACGGGGCCGAAAAAATACTTCGCTGGTTATTATCGGTAAGAAGAACTCCCGAGTATCTGATAATGTTGGCGAATATAAAC
ATTGCCAAACAGGCTTGGATAGAGGCTGAAACACAACTGCGCGATGCGATTGAGCTGAAACCTTCATTTGATGCCTGGGT
GAATCTCGGTAGACTTTACTTCGTATTGGAAAACTGGTCGCAAGCAAAAGTTGCTTTGCAGCGATCCCTTAAACTTCGCC
CGAATGATGTGGGCTCGCTCATTTCGCTGATAGAGTGCTATCGAAGATTGGGGGAGGTTGAACAAGCCATTTCCGAGTTG
AAGCTCCTGGTTCATAATGCCGACCTTAATCTTAGCCAACTCCATAAAATCGCTTTTTTGCTGCATTCCTTGGATCACAG
TCAAGAGGCATTCGATCTGCTGCGATTCAGAATTCCTGTTGAGGGATTTAATGAAGGTTTGATGGGACTGCTGGCTAAAC
TTGTGCTGCAACACGAAAGCATTGACGGCGCTAAAGAGTTTATCACCGGCATGCTGAGCGTCCCATCCATTAAGCGAAGA
GCCCTTGATTTACTCTTTAGACTTGAATGGGAAAGCGGGAAGGATTCTGCCTTTATCCATTATGAATCAGTACTTAAAAG
TACTCCTTCAGAAGATGTTCTTGAAGACTACCTAAGAAAGCTCATTAAATGTGGCCGCTTTGAGTTTGCCTATCAACAAC
TGAACGGTCTAAATGAAGGGCAACCCAATAACCCCGTCCTTAAATTTCTTAAAGCGTTTATTGTCTGCGAGCTGGGGCAT
TTTGATGAGGCCCTGACTGAAATTAATGCGCTTATCGCACAATCCCCGGAAGACGGACAATTCATTGAACAGAAGGTTAA
GACACTGCTCTCAATGAAACGGGCTGAGGAGGCTTTTGAACTGATGCAGCTCCGGTTAAAGCTACCGGATGTTAAACAGG
GGACGTATGCGCTCTATGCCAGCGTTTTGAAATTGAGTGGTAGGGAACAGGAATATAGACGACTTTACGATTTCGATAAG
CATATCAACTGTATTCAGATTGATCTGACATCAAACAACCTGCATGAACGGCTCAAGCAAAAGCTCACAGGAATGCATAG
TGGCAATCGAGAGCCCTTCGAACAATCTCTGCGTGGAGGAAGTCAGACCACTGGTCATTTGTTCGAAAGCGGTGACCCGG
ATATTGCAGAGCTCAAGGAAAGATTGATGAAGCAGTTGGCGGAGCTGTTCTCGCGTGTAGACTTCAGTTCATCTGCTCCG
TTGAACTCGTTGAATGTGGGTGAATTCACTATCACTGACTCCTGGTCAGTCCTGCTCAAAGACACGCACTTTCACGCCAA
TCATTTTCATAATGCCGGTGATCTCAGTGCTTGCCTATATTTGGATGTGTCCGGGGTGAACAGCCATCCGGGCGAAGGAT
GGATAAAATTTGGGGAGGCGGAACTGGGAGGTTGGGTGCAGGATTGTCCCGACTACTGTGTTAAGCCTGACACCGGGCTT
TTGGTCGTATTTCCCTCTTATATGTGGCACGGAACTACACCATTCCTGAGTGACAAACAGCGGATGACTATCGCCTTTGA
TCTGCGCTTTTTAAGAGACTGA

Upstream 100 bases:

>100_bases
CTGGTACGCTCGCGTAAATGTTAAGTTCTAATTGAACTGACATTTATCGTAGCAACAAGCCAGCCTCCGGGCTGGCTTTT
TATTTACAGGTGTAATGGTG

Downstream 100 bases:

>100_bases
ATCAGATGTTGGCTAGTCATCGGGTTTAGCATTACAGTTGCCTACAAACCCTGCCCACAGCCCATTCTCCCATGTTGACA
CAGGTCAACATTTTGTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein; Tetratricopeptide Repeat Protein; TPR Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MNTQQVFISGVQLFQAGNFAGASQCFSTVVQQIPHHLDAHFLLAQCRRKLNDPDGAEKILRWLLSVRRTPEYLIMLANIN
IAKQAWIEAETQLRDAIELKPSFDAWVNLGRLYFVLENWSQAKVALQRSLKLRPNDVGSLISLIECYRRLGEVEQAISEL
KLLVHNADLNLSQLHKIAFLLHSLDHSQEAFDLLRFRIPVEGFNEGLMGLLAKLVLQHESIDGAKEFITGMLSVPSIKRR
ALDLLFRLEWESGKDSAFIHYESVLKSTPSEDVLEDYLRKLIKCGRFEFAYQQLNGLNEGQPNNPVLKFLKAFIVCELGH
FDEALTEINALIAQSPEDGQFIEQKVKTLLSMKRAEEAFELMQLRLKLPDVKQGTYALYASVLKLSGREQEYRRLYDFDK
HINCIQIDLTSNNLHERLKQKLTGMHSGNREPFEQSLRGGSQTTGHLFESGDPDIAELKERLMKQLAELFSRVDFSSSAP
LNSLNVGEFTITDSWSVLLKDTHFHANHFHNAGDLSACLYLDVSGVNSHPGEGWIKFGEAELGGWVQDCPDYCVKPDTGL
LVVFPSYMWHGTTPFLSDKQRMTIAFDLRFLRD

Sequences:

>Translated_593_residues
MNTQQVFISGVQLFQAGNFAGASQCFSTVVQQIPHHLDAHFLLAQCRRKLNDPDGAEKILRWLLSVRRTPEYLIMLANIN
IAKQAWIEAETQLRDAIELKPSFDAWVNLGRLYFVLENWSQAKVALQRSLKLRPNDVGSLISLIECYRRLGEVEQAISEL
KLLVHNADLNLSQLHKIAFLLHSLDHSQEAFDLLRFRIPVEGFNEGLMGLLAKLVLQHESIDGAKEFITGMLSVPSIKRR
ALDLLFRLEWESGKDSAFIHYESVLKSTPSEDVLEDYLRKLIKCGRFEFAYQQLNGLNEGQPNNPVLKFLKAFIVCELGH
FDEALTEINALIAQSPEDGQFIEQKVKTLLSMKRAEEAFELMQLRLKLPDVKQGTYALYASVLKLSGREQEYRRLYDFDK
HINCIQIDLTSNNLHERLKQKLTGMHSGNREPFEQSLRGGSQTTGHLFESGDPDIAELKERLMKQLAELFSRVDFSSSAP
LNSLNVGEFTITDSWSVLLKDTHFHANHFHNAGDLSACLYLDVSGVNSHPGEGWIKFGEAELGGWVQDCPDYCVKPDTGL
LVVFPSYMWHGTTPFLSDKQRMTIAFDLRFLRD
>Mature_593_residues
MNTQQVFISGVQLFQAGNFAGASQCFSTVVQQIPHHLDAHFLLAQCRRKLNDPDGAEKILRWLLSVRRTPEYLIMLANIN
IAKQAWIEAETQLRDAIELKPSFDAWVNLGRLYFVLENWSQAKVALQRSLKLRPNDVGSLISLIECYRRLGEVEQAISEL
KLLVHNADLNLSQLHKIAFLLHSLDHSQEAFDLLRFRIPVEGFNEGLMGLLAKLVLQHESIDGAKEFITGMLSVPSIKRR
ALDLLFRLEWESGKDSAFIHYESVLKSTPSEDVLEDYLRKLIKCGRFEFAYQQLNGLNEGQPNNPVLKFLKAFIVCELGH
FDEALTEINALIAQSPEDGQFIEQKVKTLLSMKRAEEAFELMQLRLKLPDVKQGTYALYASVLKLSGREQEYRRLYDFDK
HINCIQIDLTSNNLHERLKQKLTGMHSGNREPFEQSLRGGSQTTGHLFESGDPDIAELKERLMKQLAELFSRVDFSSSAP
LNSLNVGEFTITDSWSVLLKDTHFHANHFHNAGDLSACLYLDVSGVNSHPGEGWIKFGEAELGGWVQDCPDYCVKPDTGL
LVVFPSYMWHGTTPFLSDKQRMTIAFDLRFLRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67484; Mature: 67484

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQQVFISGVQLFQAGNFAGASQCFSTVVQQIPHHLDAHFLLAQCRRKLNDPDGAEKIL
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RWLLSVRRTPEYLIMLANINIAKQAWIEAETQLRDAIELKPSFDAWVNLGRLYFVLENWS
HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCH
QAKVALQRSLKLRPNDVGSLISLIECYRRLGEVEQAISELKLLVHNADLNLSQLHKIAFL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LHSLDHSQEAFDLLRFRIPVEGFNEGLMGLLAKLVLQHESIDGAKEFITGMLSVPSIKRR
HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHH
ALDLLFRLEWESGKDSAFIHYESVLKSTPSEDVLEDYLRKLIKCGRFEFAYQQLNGLNEG
HHHHHHEEECCCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
QPNNPVLKFLKAFIVCELGHFDEALTEINALIAQSPEDGQFIEQKVKTLLSMKRAEEAFE
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LMQLRLKLPDVKQGTYALYASVLKLSGREQEYRRLYDFDKHINCIQIDLTSNNLHERLKQ
HHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
KLTGMHSGNREPFEQSLRGGSQTTGHLFESGDPDIAELKERLMKQLAELFSRVDFSSSAP
HHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
LNSLNVGEFTITDSWSVLLKDTHFHANHFHNAGDLSACLYLDVSGVNSHPGEGWIKFGEA
CCCCCCCEEEEECCCEEEEECCEEHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCH
ELGGWVQDCPDYCVKPDTGLLVVFPSYMWHGTTPFLSDKQRMTIAFDLRFLRD
HHCCHHHHCCHHCCCCCCCEEEEECCHHHCCCCCCCCCCCCEEEEEEEHHHCC
>Mature Secondary Structure
MNTQQVFISGVQLFQAGNFAGASQCFSTVVQQIPHHLDAHFLLAQCRRKLNDPDGAEKIL
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RWLLSVRRTPEYLIMLANINIAKQAWIEAETQLRDAIELKPSFDAWVNLGRLYFVLENWS
HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCH
QAKVALQRSLKLRPNDVGSLISLIECYRRLGEVEQAISELKLLVHNADLNLSQLHKIAFL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LHSLDHSQEAFDLLRFRIPVEGFNEGLMGLLAKLVLQHESIDGAKEFITGMLSVPSIKRR
HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHH
ALDLLFRLEWESGKDSAFIHYESVLKSTPSEDVLEDYLRKLIKCGRFEFAYQQLNGLNEG
HHHHHHEEECCCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
QPNNPVLKFLKAFIVCELGHFDEALTEINALIAQSPEDGQFIEQKVKTLLSMKRAEEAFE
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LMQLRLKLPDVKQGTYALYASVLKLSGREQEYRRLYDFDKHINCIQIDLTSNNLHERLKQ
HHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
KLTGMHSGNREPFEQSLRGGSQTTGHLFESGDPDIAELKERLMKQLAELFSRVDFSSSAP
HHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
LNSLNVGEFTITDSWSVLLKDTHFHANHFHNAGDLSACLYLDVSGVNSHPGEGWIKFGEA
CCCCCCCEEEEECCCEEEEECCEEHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCH
ELGGWVQDCPDYCVKPDTGLLVVFPSYMWHGTTPFLSDKQRMTIAFDLRFLRD
HHCCHHHHCCHHCCCCCCCEEEEECCHHHCCCCCCCCCCCCEEEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA