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The map label for this gene is yfcA [C]

Identifier: 119774385

GI number: 119774385

Start: 1530708

End: 1531481

Strand: Reverse

Name: yfcA [C]

Synonym: Sama_1248

Alternate gene names: 119774385

Gene position: 1531481-1530708 (Counterclockwise)

Preceding gene: 119774386

Following gene: 119774384

Centisome position: 35.57

GC content: 56.2

Gene sequence:

>774_bases
GTGGAATTACTGCAAGACCCCACCAGCCTGCTGTTGTTGGCGCTGGTCGGTCTGATTGCCGGATTTATTGACGCAGTTGT
GGGCGGTGGCGGCCTCCTGTCGATTCCGGCATTGCTGTCATTCGGACTACCGCCCCATCAGGCGCTGGGTACCAATAAAT
TGTCGGCCTGTTTTGGCTCGGCTACCGCGGCTTGGACCTACTACCGGCAGCAACTATTGACCCCGACCTTTTGGCGTCAC
AGTGCCGCAGCCACCTTTATTGGCGCCCTGCTGGGGACAATCGCCGTTTACCTTACCGATGCCGGGATTTTGCAAAAGCT
GCTGCCGCTCATCATCATGGCTATCGCCCTTTACACCCTGATCAAACCCGCCGCCATTGAGCACCCAAAAGCACAGGAGC
CACAGGCGCCGGCCAGCACCAAACACCAATGGATGCAGGGCGTGCCTCTGGGATTTTACGATGGCTACGCCGGCCCCGGA
ATTGGTGCCTTTTGGACCTTGAGTTCGAGCCGCCTTTACCGTTTACCGGTATTGCAAAATTGTGCCTTGGCAAGGGCCAT
GACCCTGATTAGCAACATCACCGCCTTATCAGTGTTTATGATCTTTGGCCAGGTTGACATTGCAGTGGGTTTGTTTCTGG
GCGCATCCATGATGGCAGGGGCCTACCTCGGTGCCCGCAGCGCCATTCATTTTGGGCTTCCCTTTATTCGGCCAGTGTTT
ATTCTGATTGTGTTTGCCGCATCCACCCAACTCGCCTGGAGAGCCTGGTTTTGA

Upstream 100 bases:

>100_bases
GATCACCATATTGGACAGACGCCTTGTCAGTAAAAGATATGGCAAGTCTCTGCTGGACGCCCTGCCCCCTTATCGCAGGG
TTATTGAATAGGAACCCTCT

Downstream 100 bases:

>100_bases
AATATGACGGATTACTGTCACGCCTGCGAAGCCAGCTGAAAACCCTGGAACAGGAAGTACTTCAGCACGATGCATCGCTG
CCCGCCCATAGCCGTAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MELLQDPTSLLLLALVGLIAGFIDAVVGGGGLLSIPALLSFGLPPHQALGTNKLSACFGSATAAWTYYRQQLLTPTFWRH
SAAATFIGALLGTIAVYLTDAGILQKLLPLIIMAIALYTLIKPAAIEHPKAQEPQAPASTKHQWMQGVPLGFYDGYAGPG
IGAFWTLSSSRLYRLPVLQNCALARAMTLISNITALSVFMIFGQVDIAVGLFLGASMMAGAYLGARSAIHFGLPFIRPVF
ILIVFAASTQLAWRAWF

Sequences:

>Translated_257_residues
MELLQDPTSLLLLALVGLIAGFIDAVVGGGGLLSIPALLSFGLPPHQALGTNKLSACFGSATAAWTYYRQQLLTPTFWRH
SAAATFIGALLGTIAVYLTDAGILQKLLPLIIMAIALYTLIKPAAIEHPKAQEPQAPASTKHQWMQGVPLGFYDGYAGPG
IGAFWTLSSSRLYRLPVLQNCALARAMTLISNITALSVFMIFGQVDIAVGLFLGASMMAGAYLGARSAIHFGLPFIRPVF
ILIVFAASTQLAWRAWF
>Mature_257_residues
MELLQDPTSLLLLALVGLIAGFIDAVVGGGGLLSIPALLSFGLPPHQALGTNKLSACFGSATAAWTYYRQQLLTPTFWRH
SAAATFIGALLGTIAVYLTDAGILQKLLPLIIMAIALYTLIKPAAIEHPKAQEPQAPASTKHQWMQGVPLGFYDGYAGPG
IGAFWTLSSSRLYRLPVLQNCALARAMTLISNITALSVFMIFGQVDIAVGLFLGASMMAGAYLGARSAIHFGLPFIRPVF
ILIVFAASTQLAWRAWF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=258, Percent_Identity=32.5581395348837, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27422; Mature: 27422

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLQDPTSLLLLALVGLIAGFIDAVVGGGGLLSIPALLSFGLPPHQALGTNKLSACFGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHCC
ATAAWTYYRQQLLTPTFWRHSAAATFIGALLGTIAVYLTDAGILQKLLPLIIMAIALYTL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKPAAIEHPKAQEPQAPASTKHQWMQGVPLGFYDGYAGPGIGAFWTLSSSRLYRLPVLQN
HHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEECHHHHH
CALARAMTLISNITALSVFMIFGQVDIAVGLFLGASMMAGAYLGARSAIHFGLPFIRPVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ILIVFAASTQLAWRAWF
HHHHHHHCCHHHHEECC
>Mature Secondary Structure
MELLQDPTSLLLLALVGLIAGFIDAVVGGGGLLSIPALLSFGLPPHQALGTNKLSACFGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHCC
ATAAWTYYRQQLLTPTFWRHSAAATFIGALLGTIAVYLTDAGILQKLLPLIIMAIALYTL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKPAAIEHPKAQEPQAPASTKHQWMQGVPLGFYDGYAGPGIGAFWTLSSSRLYRLPVLQN
HHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEECHHHHH
CALARAMTLISNITALSVFMIFGQVDIAVGLFLGASMMAGAYLGARSAIHFGLPFIRPVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ILIVFAASTQLAWRAWF
HHHHHHHCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]