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The map label for this gene is nrfB [H]

Identifier: 119774344

GI number: 119774344

Start: 1480922

End: 1481902

Strand: Reverse

Name: nrfB [H]

Synonym: Sama_1207

Alternate gene names: 119774344

Gene position: 1481902-1480922 (Counterclockwise)

Preceding gene: 119774345

Following gene: 119774343

Centisome position: 34.41

GC content: 57.39

Gene sequence:

>981_bases
ATGATGAAAACACTAACCCTCAGCGCCATCCTTGGCTCGCTGCTTGTCTCGGGGATGCTGATGCACAGCCCCGCACAGGC
CGCAAAATGGGACGCCAAGATGACTCCCGACGAGGTTGAGGCCACACTGGACAAGAAGTTCGCCGAAGGCGACTACTCGC
CCAAAGGGGCCGATTCCTGTTTGATGTGCCACAAAAAGTCTGAAAAAGTCATGGATCTCTTCAAGGGTGTCCATGGTGCA
ACTGACTCAAGCAAAAGCCCCATGGCCGGGCTGCAGTGCGAGTCCTGCCACGGCCCCATGGGCAAACACAACAAGGGTGG
TAACGAACCGATGATCACCTTCGGCAAGGATTCCACCCTGAGCGCCGAAAAGCAAAACAGTGTGTGTATGTCATGTCACC
AGGATGACAAGCGCATGGCCTGGAATGGCGGTCACCACGACAATGCCGATGTAGCCTGCGCCTCATGCCACAGTGTGCAC
ACTGCCAAAGACCCTGTGCTGTCCAAGAGCACAGAGATGGAAGTGTGCACCAGCTGTCACACCAAGCAAAAGACTGAACT
GAACAAGCGCTCCAGCCATCCGCTCAAATGGGCCCAGATGGTGTGCAGTGACTGCCACAACCCCCACGGCAGCCTGGGCG
ATGCCGCGTTGGTGAAACCGTCGGTAAACGAAACCTGCTATGCCTGCCACACGGAGAAACGGGGCCCAAAACTGTGGGAG
CATGCGCCCGTCACTGAGAATTGTGCCGCTTGCCACAATCCCCACGGCAGTGTGAATGACGCCATGCTCAAGGCTCGTGC
CCCCATGCTGTGTCAGGAATGTCACGCAAGCGATGGCCACGCCAGCCGTGCCAACCTGGGCAACACAGGCTTTGGCAGCG
AAGTGGGCGATAACGCCTTCACCGGTGGCAGAAGCTGCCTGAATTGTCACAGCCAGGTGCATGGTTCCAATCATCCATCC
GGCAAGCTGCTGCAACGTTAA

Upstream 100 bases:

>100_bases
GTGTTACCGACCACACTGTGGTGAAAATGTAATTGACCCTATCCCGGGGAGAGTCCGCTCTCCCCTTCCCCTCTGGAGAC
CGGTCAAATAAGGAAACGAG

Downstream 100 bases:

>100_bases
GGAGGCGCCATCATGAGATTTCAACTCAATATGATCACCCTGGCGCTGCTGGCGGCCTCAGCTCCGGCACTGGCCGGTGG
CTACAGCCTGAACAATGCCA

Product: decaheme cytochrome c MtrA

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MMKTLTLSAILGSLLVSGMLMHSPAQAAKWDAKMTPDEVEATLDKKFAEGDYSPKGADSCLMCHKKSEKVMDLFKGVHGA
TDSSKSPMAGLQCESCHGPMGKHNKGGNEPMITFGKDSTLSAEKQNSVCMSCHQDDKRMAWNGGHHDNADVACASCHSVH
TAKDPVLSKSTEMEVCTSCHTKQKTELNKRSSHPLKWAQMVCSDCHNPHGSLGDAALVKPSVNETCYACHTEKRGPKLWE
HAPVTENCAACHNPHGSVNDAMLKARAPMLCQECHASDGHASRANLGNTGFGSEVGDNAFTGGRSCLNCHSQVHGSNHPS
GKLLQR

Sequences:

>Translated_326_residues
MMKTLTLSAILGSLLVSGMLMHSPAQAAKWDAKMTPDEVEATLDKKFAEGDYSPKGADSCLMCHKKSEKVMDLFKGVHGA
TDSSKSPMAGLQCESCHGPMGKHNKGGNEPMITFGKDSTLSAEKQNSVCMSCHQDDKRMAWNGGHHDNADVACASCHSVH
TAKDPVLSKSTEMEVCTSCHTKQKTELNKRSSHPLKWAQMVCSDCHNPHGSLGDAALVKPSVNETCYACHTEKRGPKLWE
HAPVTENCAACHNPHGSVNDAMLKARAPMLCQECHASDGHASRANLGNTGFGSEVGDNAFTGGRSCLNCHSQVHGSNHPS
GKLLQR
>Mature_326_residues
MMKTLTLSAILGSLLVSGMLMHSPAQAAKWDAKMTPDEVEATLDKKFAEGDYSPKGADSCLMCHKKSEKVMDLFKGVHGA
TDSSKSPMAGLQCESCHGPMGKHNKGGNEPMITFGKDSTLSAEKQNSVCMSCHQDDKRMAWNGGHHDNADVACASCHSVH
TAKDPVLSKSTEMEVCTSCHTKQKTELNKRSSHPLKWAQMVCSDCHNPHGSLGDAALVKPSVNETCYACHTEKRGPKLWE
HAPVTENCAACHNPHGSVNDAMLKARAPMLCQECHASDGHASRANLGNTGFGSEVGDNAFTGGRSCLNCHSQVHGSNHPS
GKLLQR

Specific function: Plays a role in nitrite reduction [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082366, Length=196, Percent_Identity=33.6734693877551, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017564
- InterPro:   IPR011031 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34949; Mature: 34949

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
11.0 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
11.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKTLTLSAILGSLLVSGMLMHSPAQAAKWDAKMTPDEVEATLDKKFAEGDYSPKGADSC
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
LMCHKKSEKVMDLFKGVHGATDSSKSPMAGLQCESCHGPMGKHNKGGNEPMITFGKDSTL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCC
SAEKQNSVCMSCHQDDKRMAWNGGHHDNADVACASCHSVHTAKDPVLSKSTEMEVCTSCH
CCHHCCCEEECCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
TKQKTELNKRSSHPLKWAQMVCSDCHNPHGSLGDAALVKPSVNETCYACHTEKRGPKLWE
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCC
HAPVTENCAACHNPHGSVNDAMLKARAPMLCQECHASDGHASRANLGNTGFGSEVGDNAF
CCCCCCCHHHHCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
TGGRSCLNCHSQVHGSNHPSGKLLQR
CCCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MMKTLTLSAILGSLLVSGMLMHSPAQAAKWDAKMTPDEVEATLDKKFAEGDYSPKGADSC
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
LMCHKKSEKVMDLFKGVHGATDSSKSPMAGLQCESCHGPMGKHNKGGNEPMITFGKDSTL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCC
SAEKQNSVCMSCHQDDKRMAWNGGHHDNADVACASCHSVHTAKDPVLSKSTEMEVCTSCH
CCHHCCCEEECCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
TKQKTELNKRSSHPLKWAQMVCSDCHNPHGSLGDAALVKPSVNETCYACHTEKRGPKLWE
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCC
HAPVTENCAACHNPHGSVNDAMLKARAPMLCQECHASDGHASRANLGNTGFGSEVGDNAF
CCCCCCCHHHHCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
TGGRSCLNCHSQVHGSNHPSGKLLQR
CCCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]