The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is rimK [C]

Identifier: 119774294

GI number: 119774294

Start: 1410321

End: 1411772

Strand: Direct

Name: rimK [C]

Synonym: Sama_1157

Alternate gene names: 119774294

Gene position: 1410321-1411772 (Clockwise)

Preceding gene: 119774292

Following gene: 119774296

Centisome position: 32.75

GC content: 51.86

Gene sequence:

>1452_bases
ATGGCGCAGCTGTTGATAGTGACGGATAACAAGGAGGACTGGCGCCCCTATCTGCCCAGCGAGCAGATGGTGACGGTGAA
TGAGTATCTGGCCATGGGGGCCTGGGGCAACAGCAAGAATGTGCAGGTATTGAACCTGTGCCGCAACTACGACTACCTCT
CCAACGGCTATTATTGCTCGCTGCTGGCCGAAGCCCGTGGCCACAGGGTCTTGCCCAGAGTCATGACCATCAATGACTTG
TCTCAGGACCGTTTTTTCAGCCTGCCTCAGGGCGGACTTGAAAAACTGAGTGCCGATCTGGCCGAACTCAGCTTCAAGCT
GTTTTTTGGTTACTGCGATATTCCCGCCCTCGAGCGCATTGGTCGCAAAATATTTGAACGTTTTACCGTGCCTGTGCTGG
AAGTGAAGCTGGTGAAGTTACAGGAAAAGTGGCAGGTCGACAGTATTCAGCCATTTCCCTATCAGGCGTTGAATGATGCT
GAACAAGATGCCTTTGCCAACTCCCTGGAAGTGTTTTCACAGAAGGTGTGGCGTAAGCCCCGGCGTTCACGCAAGTTTCG
TTACGAGATGGCAATGCTGGTGGATGAGCGGGAAAAAATGCCTCCATCAAACAAAGGGGCATTGAACCGCTTTATCAAGG
CCGCAAACCGCTTGGGGATGGAGCTTGAGTTGATTGGGCCACATGAACTCACAAGGCTCGGGGAGTTTGACGGCCTCTTT
ATTCGCTCCACCACGAATATCAGTAACTTTACCTACCGTTTCGCCAAAAGCGCCGAGCAGCTGGGACTTATTGTGATGGA
TGATCCCGAGTCTATCATGAAGTGTACCAACAAGGTATTTTTATCCGAGCTTTTGGCCAGCCACAAGGTTCCTGCACCAA
AGAGCATGATTTTTAAAGCATCCGATGAAGGCTGGCAGGATACGCTCATCGCCGAAATCGGCTTGCCAGCGGTACTTAAG
GTACCGGATGGCGCCTTTTCCCTGGGGGTAGTCAAGGTGAAAGAGCGGGCACAGCTGGAAGCAGAGGCGATGCGTATCTT
CCAGCACAGCAGTTTAATCCTGGCCCAGGAATACCTGCCGACCGAATTTGATTGGCGTATTGGGGTACTTAACCGCCAGC
CAATCTACGCCTGCCGTTACTATATGAGCCGTGGTCACTGGCAAATTTACCAGCACCACAAGAGTGGGCGAGTAAGCAGC
GGCGGTTTCGATGCTATGGATATGAAGTCGGTCCCCGGTCAGGTGGTGGATGCCGCCGTCAAGGCGGCCAATTTAATCGG
CAGTGGTTTTTACGGTGTCGACCTGAAAGAAGTCAATGGCAAAGCCTATGTGATTGAAGTAAATGACAACCCCAGCGTTG
ATCACGGTGTGGAAGATAAATACCTTGGAGACTTGCTTTACGACAGGGTGATGACCGAATTTCTGCGGCGTATTCAGTTA
CGGGGTTTTTAA

Upstream 100 bases:

>100_bases
GAGTTGGGCTAGGCTCGCGAGGCGATATTCCATGGTGATGGCCATCCACAATAGGATAGGCTCATTAAATCCAGTTCAGT
GACAGGAGGCAAGTTCAATT

Downstream 100 bases:

>100_bases
ATCAACTGGAAGGAGACTCTTGCCCATCCCTGGGCGACCACTGTCAATTTATTGTCAGCCTTTGACAGGGTGTTGAAGAC
TGAGGCGATAGCAATTGCGG

Product: glutathione synthase

Products: NA

Alternate protein names: Glutathione Synthase/Ribosomal; RimK Domain Protein ATP-Grasp; Glutathione Synthase; Ribosomal Protein-Related Protein; RimK-Like ATP-Grasp Domain Family; Alpha-L-Glutamate Ligase Family Protein; RimK-Like ATP-Grasp; 30S Ribosomal Protein-Related Protein; Ribosomal Protein-Like Protein; GCN5-Related N-Acetyltransferase; Rimk Domain Protein ATP-Grasp; Ribosomal Protein; Fused RimK-Like Domain/ Domain-Containing Protein; RimK Domain-Containing Protein; Glutathione Synthase/Ribosomal Glutaminyl Transferase; 30S Ribosomal Protein; Ribosomal -Glutamic Acid Ligase

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MAQLLIVTDNKEDWRPYLPSEQMVTVNEYLAMGAWGNSKNVQVLNLCRNYDYLSNGYYCSLLAEARGHRVLPRVMTINDL
SQDRFFSLPQGGLEKLSADLAELSFKLFFGYCDIPALERIGRKIFERFTVPVLEVKLVKLQEKWQVDSIQPFPYQALNDA
EQDAFANSLEVFSQKVWRKPRRSRKFRYEMAMLVDEREKMPPSNKGALNRFIKAANRLGMELELIGPHELTRLGEFDGLF
IRSTTNISNFTYRFAKSAEQLGLIVMDDPESIMKCTNKVFLSELLASHKVPAPKSMIFKASDEGWQDTLIAEIGLPAVLK
VPDGAFSLGVVKVKERAQLEAEAMRIFQHSSLILAQEYLPTEFDWRIGVLNRQPIYACRYYMSRGHWQIYQHHKSGRVSS
GGFDAMDMKSVPGQVVDAAVKAANLIGSGFYGVDLKEVNGKAYVIEVNDNPSVDHGVEDKYLGDLLYDRVMTEFLRRIQL
RGF

Sequences:

>Translated_483_residues
MAQLLIVTDNKEDWRPYLPSEQMVTVNEYLAMGAWGNSKNVQVLNLCRNYDYLSNGYYCSLLAEARGHRVLPRVMTINDL
SQDRFFSLPQGGLEKLSADLAELSFKLFFGYCDIPALERIGRKIFERFTVPVLEVKLVKLQEKWQVDSIQPFPYQALNDA
EQDAFANSLEVFSQKVWRKPRRSRKFRYEMAMLVDEREKMPPSNKGALNRFIKAANRLGMELELIGPHELTRLGEFDGLF
IRSTTNISNFTYRFAKSAEQLGLIVMDDPESIMKCTNKVFLSELLASHKVPAPKSMIFKASDEGWQDTLIAEIGLPAVLK
VPDGAFSLGVVKVKERAQLEAEAMRIFQHSSLILAQEYLPTEFDWRIGVLNRQPIYACRYYMSRGHWQIYQHHKSGRVSS
GGFDAMDMKSVPGQVVDAAVKAANLIGSGFYGVDLKEVNGKAYVIEVNDNPSVDHGVEDKYLGDLLYDRVMTEFLRRIQL
RGF
>Mature_482_residues
AQLLIVTDNKEDWRPYLPSEQMVTVNEYLAMGAWGNSKNVQVLNLCRNYDYLSNGYYCSLLAEARGHRVLPRVMTINDLS
QDRFFSLPQGGLEKLSADLAELSFKLFFGYCDIPALERIGRKIFERFTVPVLEVKLVKLQEKWQVDSIQPFPYQALNDAE
QDAFANSLEVFSQKVWRKPRRSRKFRYEMAMLVDEREKMPPSNKGALNRFIKAANRLGMELELIGPHELTRLGEFDGLFI
RSTTNISNFTYRFAKSAEQLGLIVMDDPESIMKCTNKVFLSELLASHKVPAPKSMIFKASDEGWQDTLIAEIGLPAVLKV
PDGAFSLGVVKVKERAQLEAEAMRIFQHSSLILAQEYLPTEFDWRIGVLNRQPIYACRYYMSRGHWQIYQHHKSGRVSSG
GFDAMDMKSVPGQVVDAAVKAANLIGSGFYGVDLKEVNGKAYVIEVNDNPSVDHGVEDKYLGDLLYDRVMTEFLRRIQLR
GF

Specific function: Responsible For The Addition Of Glutamate Residues To The C-Terminus Of Ribosomal Protein S6. [C]

COG id: COG0189

COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55092; Mature: 54961

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLLIVTDNKEDWRPYLPSEQMVTVNEYLAMGAWGNSKNVQVLNLCRNYDYLSNGYYCS
CCEEEEEECCCCCCCCCCCCCCEEEHHHHHEECCCCCCCCEEEEEHHHCCCCCCCCEEEE
LLAEARGHRVLPRVMTINDLSQDRFFSLPQGGLEKLSADLAELSFKLFFGYCDIPALERI
EEECCCCCCCCCCEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHH
GRKIFERFTVPVLEVKLVKLQEKWQVDSIQPFPYQALNDAEQDAFANSLEVFSQKVWRKP
HHHHHHHHCCCHHHHEEEHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCH
RRSRKFRYEMAMLVDEREKMPPSNKGALNRFIKAANRLGMELELIGPHELTRLGEFDGLF
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCEE
IRSTTNISNFTYRFAKSAEQLGLIVMDDPESIMKCTNKVFLSELLASHKVPAPKSMIFKA
EEEECCCCHHHHHHHCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEC
SDEGWQDTLIAEIGLPAVLKVPDGAFSLGVVKVKERAQLEAEAMRIFQHSSLILAQEYLP
CCCCCHHHHHHHCCCCEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEHHHCC
TEFDWRIGVLNRQPIYACRYYMSRGHWQIYQHHKSGRVSSGGFDAMDMKSVPGQVVDAAV
CCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
KAANLIGSGFYGVDLKEVNGKAYVIEVNDNPSVDHGVEDKYLGDLLYDRVMTEFLRRIQL
HHHHHHCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
RGF
CCC
>Mature Secondary Structure 
AQLLIVTDNKEDWRPYLPSEQMVTVNEYLAMGAWGNSKNVQVLNLCRNYDYLSNGYYCS
CEEEEEECCCCCCCCCCCCCCEEEHHHHHEECCCCCCCCEEEEEHHHCCCCCCCCEEEE
LLAEARGHRVLPRVMTINDLSQDRFFSLPQGGLEKLSADLAELSFKLFFGYCDIPALERI
EEECCCCCCCCCCEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHH
GRKIFERFTVPVLEVKLVKLQEKWQVDSIQPFPYQALNDAEQDAFANSLEVFSQKVWRKP
HHHHHHHHCCCHHHHEEEHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCH
RRSRKFRYEMAMLVDEREKMPPSNKGALNRFIKAANRLGMELELIGPHELTRLGEFDGLF
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCEE
IRSTTNISNFTYRFAKSAEQLGLIVMDDPESIMKCTNKVFLSELLASHKVPAPKSMIFKA
EEEECCCCHHHHHHHCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEC
SDEGWQDTLIAEIGLPAVLKVPDGAFSLGVVKVKERAQLEAEAMRIFQHSSLILAQEYLP
CCCCCHHHHHHHCCCCEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEHHHCC
TEFDWRIGVLNRQPIYACRYYMSRGHWQIYQHHKSGRVSSGGFDAMDMKSVPGQVVDAAV
CCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
KAANLIGSGFYGVDLKEVNGKAYVIEVNDNPSVDHGVEDKYLGDLLYDRVMTEFLRRIQL
HHHHHHCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
RGF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Glu; Ribosomal protein S6 [C]

Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]

General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA