The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is fabZ

Identifier: 119774287

GI number: 119774287

Start: 1400901

End: 1401362

Strand: Direct

Name: fabZ

Synonym: Sama_1150

Alternate gene names: 119774287

Gene position: 1400901-1401362 (Clockwise)

Preceding gene: 119774286

Following gene: 119774288

Centisome position: 32.53

GC content: 49.35

Gene sequence:

>462_bases
GTGTCTAATCAAATGAACACCATGGATATCAAAGAGATACTTAAGTATCTGCCCCACAGATATCCGTTTCTGCTCATAGA
CCGTGTGCTGGACTTCACCGCTGGTGAATCTTTGCACGCCATCAAAAACGTCACCATCAACGAGCCATTTTTTGTGGGGC
ATTTCCCTGTCGCTCCCGTGATGCCTGGCGTATTGATCCTTGAAGCTATGGCCCAGGCAACTGGCCTTCTGGCATTCAAG
ACCATGAGCAGCGAGCCATCGCCAGATGTGCTTTATTATTTTGCCGGTATCGACAATGCTCGTTTTAAACGTGTTGTTGA
GCCGGGCGACCAGCTGCACTTTGAAGTGAAAATGATTAAGGAACGCCGCGGGATTGGTGTGTTCTATGGTGAGGCCAAAG
TGGATGGTGAGCTGGTTTGCAGCGCAGAAATCATGTGTGCCCGCAGAGAGATTAGCAAGTGA

Upstream 100 bases:

>100_bases
ATGAGCTTTTCCAGCGCGTAAAGGTGCTGGAAGGCAAACAGCAAGAAGAAAAGTAACGCACAGCCGCTTGCGAGCCAGTG
CATCCTGAGGAACAAAATTC

Downstream 100 bases:

>100_bases
TCAGTGAATTAGCTTTCGTCCATCCCGACGCGAAAATTGGCAACAACGTGACCATTGGCCCCTGGAGCTATATTGGCCCG
GGTGTCGAAATTGGTGACGA

Product: (3R)-hydroxymyristoyl-ACP dehydratase

Products: NA

Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSNQMNTMDIKEILKYLPHRYPFLLIDRVLDFTAGESLHAIKNVTINEPFFVGHFPVAPVMPGVLILEAMAQATGLLAFK
TMSSEPSPDVLYYFAGIDNARFKRVVEPGDQLHFEVKMIKERRGIGVFYGEAKVDGELVCSAEIMCARREISK

Sequences:

>Translated_153_residues
MSNQMNTMDIKEILKYLPHRYPFLLIDRVLDFTAGESLHAIKNVTINEPFFVGHFPVAPVMPGVLILEAMAQATGLLAFK
TMSSEPSPDVLYYFAGIDNARFKRVVEPGDQLHFEVKMIKERRGIGVFYGEAKVDGELVCSAEIMCARREISK
>Mature_152_residues
SNQMNTMDIKEILKYLPHRYPFLLIDRVLDFTAGESLHAIKNVTINEPFFVGHFPVAPVMPGVLILEAMAQATGLLAFKT
MSSEPSPDVLYYFAGIDNARFKRVVEPGDQLHFEVKMIKERRGIGVFYGEAKVDGELVCSAEIMCARREISK

Specific function: Involved in saturated fatty acids biosynthesis

COG id: COG0764

COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioester dehydratase family. FabZ subfamily

Homologues:

Organism=Escherichia coli, GI1786377, Length=148, Percent_Identity=62.1621621621622, Blast_Score=188, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FABZ_SHEAM (A1S4Q1)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_927027.1
- ProteinModelPortal:   A1S4Q1
- SMR:   A1S4Q1
- STRING:   A1S4Q1
- GeneID:   4603402
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_1150
- NMPDR:   fig|326297.7.peg.1082
- eggNOG:   COG0764
- HOGENOM:   HBG433282
- OMA:   KERRGVA
- PhylomeDB:   A1S4Q1
- ProtClustDB:   PRK00006
- GO:   GO:0005737
- HAMAP:   MF_00406
- InterPro:   IPR013114
- InterPro:   IPR010084
- TIGRFAMs:   TIGR01750

Pfam domain/function: PF07977 FabA

EC number: 4.2.1.-

Molecular weight: Translated: 17240; Mature: 17109

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: ACT_SITE 54-54

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQMNTMDIKEILKYLPHRYPFLLIDRVLDFTAGESLHAIKNVTINEPFFVGHFPVAPV
CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEECCCHHHH
MPGVLILEAMAQATGLLAFKTMSSEPSPDVLYYFAGIDNARFKRVVEPGDQLHFEVKMIK
HHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCHHHHHHCCCCCCEEEHHEEEH
ERRGIGVFYGEAKVDGELVCSAEIMCARREISK
HHCCCEEEECCCCCCCEEEEHHHHHHHHHHCCC
>Mature Secondary Structure 
SNQMNTMDIKEILKYLPHRYPFLLIDRVLDFTAGESLHAIKNVTINEPFFVGHFPVAPV
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEECCCHHHH
MPGVLILEAMAQATGLLAFKTMSSEPSPDVLYYFAGIDNARFKRVVEPGDQLHFEVKMIK
HHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCHHHHHHCCCCCCEEEHHEEEH
ERRGIGVFYGEAKVDGELVCSAEIMCARREISK
HHCCCEEEECCCCCCCEEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA