Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774246

Identifier: 119774246

GI number: 119774246

Start: 1345491

End: 1345823

Strand: Direct

Name: 119774246

Synonym: Sama_1109

Alternate gene names: NA

Gene position: 1345491-1345823 (Clockwise)

Preceding gene: 119774244

Following gene: 119774248

Centisome position: 31.25

GC content: 56.46

Gene sequence:

>333_bases
ATGAGTCAGCCACAAAACGCCGCATCACTTTCTCACCCAGACAGCATTCTCAAATCCGCCACTGCCGCCGTGCAGCGCGG
CGTTGCCCGTGCCGACGGTAAACTCTGTTTAACCTCATCAAGCCTCGAATTTACCCCTTACAACACCCAGTTTGGATTGG
GGCCTTATCAGCTCTCGCGCACCGAAATAGCCAAGGCAGAAAAATGCCTCGGTAAAGGCGGCGGCATTTTGCCCGTGACC
CGGGATGCACTGCGCATCAGCTTAAGGGGCGGCGACAGCTATGAGTTTATCGTCGCCAATCCGGAAGACTGGATAGCGGC
ACTTGGCGCCTGA

Upstream 100 bases:

>100_bases
GGAATCTGTATTTCAGGACTGGTATTTCAGGACTGGTATTTCAGGACTGGTATTTCAGGACTGGTATTTCAGGACATGCA
TAGGCAATCAGGAGGCCATC

Downstream 100 bases:

>100_bases
GTTTACAGCGGCGCTCGGCGCCTGAATTTATAGCGGCGCTCGGCGCCTGAGGTTGGTGCCAGAGTATAGAGAAAGGCGGC
GAGCCTTGCGGCCATCTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSQPQNAASLSHPDSILKSATAAVQRGVARADGKLCLTSSSLEFTPYNTQFGLGPYQLSRTEIAKAEKCLGKGGGILPVT
RDALRISLRGGDSYEFIVANPEDWIAALGA

Sequences:

>Translated_110_residues
MSQPQNAASLSHPDSILKSATAAVQRGVARADGKLCLTSSSLEFTPYNTQFGLGPYQLSRTEIAKAEKCLGKGGGILPVT
RDALRISLRGGDSYEFIVANPEDWIAALGA
>Mature_109_residues
SQPQNAASLSHPDSILKSATAAVQRGVARADGKLCLTSSSLEFTPYNTQFGLGPYQLSRTEIAKAEKCLGKGGGILPVTR
DALRISLRGGDSYEFIVANPEDWIAALGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11595; Mature: 11464

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPQNAASLSHPDSILKSATAAVQRGVARADGKLCLTSSSLEFTPYNTQFGLGPYQLSR
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEECCCCCCCCCCCCEECH
TEIAKAEKCLGKGGGILPVTRDALRISLRGGDSYEFIVANPEDWIAALGA
HHHHHHHHHHCCCCCCCEEECCEEEEEECCCCCEEEEEECCHHHHHCCCC
>Mature Secondary Structure 
SQPQNAASLSHPDSILKSATAAVQRGVARADGKLCLTSSSLEFTPYNTQFGLGPYQLSR
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEECCCCCCCCCCCCEECH
TEIAKAEKCLGKGGGILPVTRDALRISLRGGDSYEFIVANPEDWIAALGA
HHHHHHHHHHCCCCCCCEEECCEEEEEECCCCCEEEEEECCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA