| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119774237
Identifier: 119774237
GI number: 119774237
Start: 1324483
End: 1324902
Strand: Direct
Name: 119774237
Synonym: Sama_1100
Alternate gene names: NA
Gene position: 1324483-1324902 (Clockwise)
Preceding gene: 119774236
Following gene: 119774238
Centisome position: 30.76
GC content: 55.71
Gene sequence:
>420_bases ATGTCTTTTATTGCAGATGAAAGCCCGGCCTTTGCTGAGGTGGTGAAAAAGAAAATTGCCGCCTTCAATGCCGAACGCTG GGATGCCAGCCAACGTCGGCCCATTGGTTTCAAACAGCTCCATGACAACGGTGAGCTTGCCGCGGGTATCGCCGGGCGCA CCTTTGGTAACTGGTGCCTTATCGATAACTTTTGGGTATGCGACAGCCTGCGTGGGCAGGGCATTGGCACCGCCATGTTG CAAACGGCCGAAGAGGAAGCCCTGGCACGAGGGTGCCGATGGTTACTGCTCGACACCCTGGATTTTCAGGCGCCTGCATT TTACCGACGCCGCGGTTATCACACCGTTTGGTGTCAGTCCGACTATCCCTTCGAGGGTGGCCAGCGCTTCTACATGGTGA AAAATCTGCAAGCCGATTGA
Upstream 100 bases:
>100_bases GCTGGCACACGCTTGTCGGCACAGCCATCATTTTGCTGGGGACGGCAATCAGTACCGGCAGCATTCCCCGACTGCGCCGC CTTGCAGGAGAGCGGATCTA
Downstream 100 bases:
>100_bases GGAGTTACGGCATTGCAATGAGGTGGTCCGGCGATACAATGGCTGCTTGCAGTCAATAAGAAGGATACCCCGTGAACCCG ACCTCCCGCCTGTTTTTGGG
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family; Blasticidin-S Acetyltransferase; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; RepC-Like Protein; Pantoate-Beta-Alanine Ligase; Acetyltransferase Protein; Histone Acetyltransferase HPA2-Like Protein; Blasticidin S-Acetyltransferase
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSFIADESPAFAEVVKKKIAAFNAERWDASQRRPIGFKQLHDNGELAAGIAGRTFGNWCLIDNFWVCDSLRGQGIGTAML QTAEEEALARGCRWLLLDTLDFQAPAFYRRRGYHTVWCQSDYPFEGGQRFYMVKNLQAD
Sequences:
>Translated_139_residues MSFIADESPAFAEVVKKKIAAFNAERWDASQRRPIGFKQLHDNGELAAGIAGRTFGNWCLIDNFWVCDSLRGQGIGTAML QTAEEEALARGCRWLLLDTLDFQAPAFYRRRGYHTVWCQSDYPFEGGQRFYMVKNLQAD >Mature_138_residues SFIADESPAFAEVVKKKIAAFNAERWDASQRRPIGFKQLHDNGELAAGIAGRTFGNWCLIDNFWVCDSLRGQGIGTAMLQ TAEEEALARGCRWLLLDTLDFQAPAFYRRRGYHTVWCQSDYPFEGGQRFYMVKNLQAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15819; Mature: 15688
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFIADESPAFAEVVKKKIAAFNAERWDASQRRPIGFKQLHDNGELAAGIAGRTFGNWCL CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCEEE IDNFWVCDSLRGQGIGTAMLQTAEEEALARGCRWLLLDTLDFQAPAFYRRRGYHTVWCQS ECCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCEEEEECC DYPFEGGQRFYMVKNLQAD CCCCCCCCEEEEEECCCCC >Mature Secondary Structure SFIADESPAFAEVVKKKIAAFNAERWDASQRRPIGFKQLHDNGELAAGIAGRTFGNWCL CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCEEE IDNFWVCDSLRGQGIGTAMLQTAEEEALARGCRWLLLDTLDFQAPAFYRRRGYHTVWCQS ECCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCEEEEECC DYPFEGGQRFYMVKNLQAD CCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA