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The map label for this gene is yqeZ [H]

Identifier: 119774160

GI number: 119774160

Start: 1236632

End: 1238221

Strand: Direct

Name: yqeZ [H]

Synonym: Sama_1023

Alternate gene names: 119774160

Gene position: 1236632-1238221 (Clockwise)

Preceding gene: 119774159

Following gene: 119774161

Centisome position: 28.72

GC content: 55.91

Gene sequence:

>1590_bases
ATGTTCAATAGGTTGTTCAATAGATTGTTCAGCCCCGAGGTTGTCAGGTTACTGGCCTCGATTAACCGGCTTTTCGCTTC
TAAACCGGGGCTGTTTGCATTACTGCTCCCCCTGCTGCTCGGCAGTTTGAATTCTGGCGTGGTGGCGAGCCCTCACGCTG
CTTTTTCCTCCGGATTTATCTTAAGCAACGCCAACATCGCAAATACCACGCCTGTATCTGACCGCGACATTGGCTCAAAC
CATTCCGCCGACTTAGCCGCTGCAGTTACGTCACACCAAAACACGGGTGCCCGGGGCCTCGAAGGGACTGTGGCTCCCAT
ATGGCTGCTGGAGGTAAAAGGCGCTATAGGGCCTGGGGTAGCTGACTATCTTGTTCGTACCCTGAACAAGGCACAAAAGC
AGGTCGTACCGCCCCAACTACTCTTGCTCACCCTGGATACCCCCGGAGGTCTGGTGGCAAGCCTGAGGGACATCAATCAA
GCCATACTCACTTCAGAAATACCGGTAGCCTGCCTGGTGTATCCGGCCGGTGCCCGCGCCGCCAGTGCCGGCACCTATAT
GCTTTACGCTTGCCATCTGGCAGCGATGGCGCCGGCCACCAGTTTAGGGGCCGCGACGCCGGTACAACTCGGGCCACCTG
CGGGAGGCGAGCCGAAGGATAAGGAAGCCGAGCAGCAAGGGGCTTCGGATATGGAGCGTAAAATCCTCAATGATGCCGTT
GCCTATATCAGGACCCTCGCACAGTTAAGAGGGCGAAACGCTGAATGGGGCGAACAGGCGGTGCGCGAGGCTGCCACTGC
GACTGCTTCTGAGGCGCTGGCGCTGGGGGCGATAGATTTAATTGCCAAAGATCCTTACGCCTTGCTTGAGGCCATTGATG
GTCGACAGTTTGTGATTAATGACACAGTCCGCGTCCTGCATACCCACAAGGCATTGCTCCTTGACGCCAAACCAGACTGG
CGAACGACTTTTCTGAGTACCATCACCAATCCAAATGTGGCTTATGTGCTGATGATGCTGGGTATCTATGGACTGCTGCT
GGAATTTTACAGTCCGGGCATGGGGATCTCCGGTGTGGTGGGCGCCATCTGTTTGCTGGTGGCCATGTTTGCCCTGCAAA
TGCTGCCAATCAATTACGCTGGCGCGGCGCTGCTGATATTGGGGATAGGGTTGCTGGTGGCCGAATCTTTGGTTCCCAGT
TTCGGCATTCTGGGGTTTGGTGGTGTAGTCGCTTTCGTGCTCGGTTCAGTCTTTCTCATCGACAGTGAGTTGGATGCCTT
TCGTATTGCCTGGCCTGTCATTCTGGCACTGGCCATGGTGAGTCTGCTGTTCTTTGCCGTGCTGGTTTCCCTGTTATTTA
AGCAGCGCCACAGGGCTGTGGTCAGTGGGCCTGAAGCAATGGTAGGTGCCAGGGCTCTGGTGCTGGATGGTTTTCCCGGT
AAAGGGCAGGTGCTTTTTATGGGAGAGCGTTGGCAGGGCCACAGTGAGCAGGCGCTGCAGAGCGGAACCTGGGTCAGGGT
AGAGTCTATCTCCGGGCTCTTGCTGGAGCTTGGTCCGCTGGATGAATCAAAGGAGAAACAAGATGAATGA

Upstream 100 bases:

>100_bases
AAATGGCACTGGTTTATAAAGACAGTGGACAAACAGGCTCAGGCACTTCTAAAGGACTGACATTGTAAGCACTCCAGAGA
CTGAGCCTTGGGAGTCGCTT

Downstream 100 bases:

>100_bases
GGTTATCTCAAGTCTGCAGGTGTCTTTCAGCCTTGTGGTGTTGCTGTTACTGCTGCTAATTATTTCGATGTTTCGCATCC
TGCGTGAATATGAGCGGGCG

Product: membrane-bound serine protease (ClpP class)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MFNRLFNRLFSPEVVRLLASINRLFASKPGLFALLLPLLLGSLNSGVVASPHAAFSSGFILSNANIANTTPVSDRDIGSN
HSADLAAAVTSHQNTGARGLEGTVAPIWLLEVKGAIGPGVADYLVRTLNKAQKQVVPPQLLLLTLDTPGGLVASLRDINQ
AILTSEIPVACLVYPAGARAASAGTYMLYACHLAAMAPATSLGAATPVQLGPPAGGEPKDKEAEQQGASDMERKILNDAV
AYIRTLAQLRGRNAEWGEQAVREAATATASEALALGAIDLIAKDPYALLEAIDGRQFVINDTVRVLHTHKALLLDAKPDW
RTTFLSTITNPNVAYVLMMLGIYGLLLEFYSPGMGISGVVGAICLLVAMFALQMLPINYAGAALLILGIGLLVAESLVPS
FGILGFGGVVAFVLGSVFLIDSELDAFRIAWPVILALAMVSLLFFAVLVSLLFKQRHRAVVSGPEAMVGARALVLDGFPG
KGQVLFMGERWQGHSEQALQSGTWVRVESISGLLLELGPLDESKEKQDE

Sequences:

>Translated_529_residues
MFNRLFNRLFSPEVVRLLASINRLFASKPGLFALLLPLLLGSLNSGVVASPHAAFSSGFILSNANIANTTPVSDRDIGSN
HSADLAAAVTSHQNTGARGLEGTVAPIWLLEVKGAIGPGVADYLVRTLNKAQKQVVPPQLLLLTLDTPGGLVASLRDINQ
AILTSEIPVACLVYPAGARAASAGTYMLYACHLAAMAPATSLGAATPVQLGPPAGGEPKDKEAEQQGASDMERKILNDAV
AYIRTLAQLRGRNAEWGEQAVREAATATASEALALGAIDLIAKDPYALLEAIDGRQFVINDTVRVLHTHKALLLDAKPDW
RTTFLSTITNPNVAYVLMMLGIYGLLLEFYSPGMGISGVVGAICLLVAMFALQMLPINYAGAALLILGIGLLVAESLVPS
FGILGFGGVVAFVLGSVFLIDSELDAFRIAWPVILALAMVSLLFFAVLVSLLFKQRHRAVVSGPEAMVGARALVLDGFPG
KGQVLFMGERWQGHSEQALQSGTWVRVESISGLLLELGPLDESKEKQDE
>Mature_529_residues
MFNRLFNRLFSPEVVRLLASINRLFASKPGLFALLLPLLLGSLNSGVVASPHAAFSSGFILSNANIANTTPVSDRDIGSN
HSADLAAAVTSHQNTGARGLEGTVAPIWLLEVKGAIGPGVADYLVRTLNKAQKQVVPPQLLLLTLDTPGGLVASLRDINQ
AILTSEIPVACLVYPAGARAASAGTYMLYACHLAAMAPATSLGAATPVQLGPPAGGEPKDKEAEQQGASDMERKILNDAV
AYIRTLAQLRGRNAEWGEQAVREAATATASEALALGAIDLIAKDPYALLEAIDGRQFVINDTVRVLHTHKALLLDAKPDW
RTTFLSTITNPNVAYVLMMLGIYGLLLEFYSPGMGISGVVGAICLLVAMFALQMLPINYAGAALLILGIGLLVAESLVPS
FGILGFGGVVAFVLGSVFLIDSELDAFRIAWPVILALAMVSLLFFAVLVSLLFKQRHRAVVSGPEAMVGARALVLDGFPG
KGQVLFMGERWQGHSEQALQSGTWVRVESISGLLLELGPLDESKEKQDE

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002810
- InterPro:   IPR002825 [H]

Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 55949; Mature: 55949

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNRLFNRLFSPEVVRLLASINRLFASKPGLFALLLPLLLGSLNSGVVASPHAAFSSGFI
CHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCHHHHCCEE
LSNANIANTTPVSDRDIGSNHSADLAAAVTSHQNTGARGLEGTVAPIWLLEVKGAIGPGV
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCH
ADYLVRTLNKAQKQVVPPQLLLLTLDTPGGLVASLRDINQAILTSEIPVACLVYPAGARA
HHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
ASAGTYMLYACHLAAMAPATSLGAATPVQLGPPAGGEPKDKEAEQQGASDMERKILNDAV
CCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHH
AYIRTLAQLRGRNAEWGEQAVREAATATASEALALGAIDLIAKDPYALLEAIDGRQFVIN
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEH
DTVRVLHTHKALLLDAKPDWRTTFLSTITNPNVAYVLMMLGIYGLLLEFYSPGMGISGVV
HHHHHHHHCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GAICLLVAMFALQMLPINYAGAALLILGIGLLVAESLVPSFGILGFGGVVAFVLGSVFLI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEE
DSELDAFRIAWPVILALAMVSLLFFAVLVSLLFKQRHRAVVSGPEAMVGARALVLDGFPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCC
KGQVLFMGERWQGHSEQALQSGTWVRVESISGLLLELGPLDESKEKQDE
CCEEEEEECCCCCCHHHHHHCCCEEEEECCCCHHHEECCCCCCHHCCCC
>Mature Secondary Structure
MFNRLFNRLFSPEVVRLLASINRLFASKPGLFALLLPLLLGSLNSGVVASPHAAFSSGFI
CHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCHHHHCCEE
LSNANIANTTPVSDRDIGSNHSADLAAAVTSHQNTGARGLEGTVAPIWLLEVKGAIGPGV
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCH
ADYLVRTLNKAQKQVVPPQLLLLTLDTPGGLVASLRDINQAILTSEIPVACLVYPAGARA
HHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
ASAGTYMLYACHLAAMAPATSLGAATPVQLGPPAGGEPKDKEAEQQGASDMERKILNDAV
CCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHH
AYIRTLAQLRGRNAEWGEQAVREAATATASEALALGAIDLIAKDPYALLEAIDGRQFVIN
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEH
DTVRVLHTHKALLLDAKPDWRTTFLSTITNPNVAYVLMMLGIYGLLLEFYSPGMGISGVV
HHHHHHHHCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GAICLLVAMFALQMLPINYAGAALLILGIGLLVAESLVPSFGILGFGGVVAFVLGSVFLI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEE
DSELDAFRIAWPVILALAMVSLLFFAVLVSLLFKQRHRAVVSGPEAMVGARALVLDGFPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCC
KGQVLFMGERWQGHSEQALQSGTWVRVESISGLLLELGPLDESKEKQDE
CCEEEEEECCCCCCHHHHHHCCCEEEEECCCCHHHEECCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]