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The map label for this gene is rimP

Identifier: 119774096

GI number: 119774096

Start: 1159104

End: 1159559

Strand: Direct

Name: rimP

Synonym: Sama_0959

Alternate gene names: 119774096

Gene position: 1159104-1159559 (Clockwise)

Preceding gene: 119774095

Following gene: 119774097

Centisome position: 26.92

GC content: 50.44

Gene sequence:

>456_bases
TTGGCGACATTGGAAACCAGACTGGCAGAAATGCTGACACCGGCTGTCGAAGCCGCTGGCTATGTGGTGTGGGGCATTGA
ATACGTGCAGGCAGGAAAGCATTCAATCCTGCGTGTTTATATCGACAGCGAGCAGGGTATTTCCGTTGACGACTGTGCTG
ATGCCAGTCGCCAAATCAGTGCAATCCTCGATGTGGAAGACCCAATTTCCAACGAATACACTCTCGAAGTGTCTTCTCCT
GGGCTGGACAGACCGCTGTTCAACGCAGCCCAATACGCCCGCTATGTGGGTGAAGATGTAAAAGTACAACTGACCATGCC
TGTTGAAGGCAGTCGGAACTTGAAAGGTGTTATCGACAAGGTTGAAGGCCAGATGCTGACCATCAAAGTCGATGGCAAGA
CATTGGTCGTTGCCCTGGACAATATCCGCAAAGGCAACATTATTGCGAAGTTTTGA

Upstream 100 bases:

>100_bases
TACGGGGTTTTTTGTTATATGGACTTTCAGATCCACCGCAGTATTTTGCGGTACAGTTACTGGGGCTTTATAGCCCTTTT
TTGTTTTTTCGGGGGTCACT

Downstream 100 bases:

>100_bases
TGGTTTCAAGGTGAACGAGGCAAGACAATGAATAAAGAGATTCTGCTGGTCGCTGAGGCGGTTTCAAACGAGAAAGCCGT
TCCGCGTGAAAAGATTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MATLETRLAEMLTPAVEAAGYVVWGIEYVQAGKHSILRVYIDSEQGISVDDCADASRQISAILDVEDPISNEYTLEVSSP
GLDRPLFNAAQYARYVGEDVKVQLTMPVEGSRNLKGVIDKVEGQMLTIKVDGKTLVVALDNIRKGNIIAKF

Sequences:

>Translated_151_residues
MATLETRLAEMLTPAVEAAGYVVWGIEYVQAGKHSILRVYIDSEQGISVDDCADASRQISAILDVEDPISNEYTLEVSSP
GLDRPLFNAAQYARYVGEDVKVQLTMPVEGSRNLKGVIDKVEGQMLTIKVDGKTLVVALDNIRKGNIIAKF
>Mature_150_residues
ATLETRLAEMLTPAVEAAGYVVWGIEYVQAGKHSILRVYIDSEQGISVDDCADASRQISAILDVEDPISNEYTLEVSSPG
LDRPLFNAAQYARYVGEDVKVQLTMPVEGSRNLKGVIDKVEGQMLTIKVDGKTLVVALDNIRKGNIIAKF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=57.6158940397351, Blast_Score=181, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_SHEAM (A1S460)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_926836.1
- ProteinModelPortal:   A1S460
- SMR:   A1S460
- STRING:   A1S460
- GeneID:   4605937
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_0959
- NMPDR:   fig|326297.7.peg.900
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- PhylomeDB:   A1S460
- ProtClustDB:   PRK00092
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 16501; Mature: 16370

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLETRLAEMLTPAVEAAGYVVWGIEYVQAGKHSILRVYIDSEQGISVDDCADASRQIS
CCCHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCEEEEEEEECCCCCCHHHHCCHHHHEE
AILDVEDPISNEYTLEVSSPGLDRPLFNAAQYARYVGEDVKVQLTMPVEGSRNLKGVIDK
EEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHCC
VEGQMLTIKVDGKTLVVALDNIRKGNIIAKF
CCCEEEEEEECCCEEEEEECCCCCCCEEEEC
>Mature Secondary Structure 
ATLETRLAEMLTPAVEAAGYVVWGIEYVQAGKHSILRVYIDSEQGISVDDCADASRQIS
CCHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCEEEEEEEECCCCCCHHHHCCHHHHEE
AILDVEDPISNEYTLEVSSPGLDRPLFNAAQYARYVGEDVKVQLTMPVEGSRNLKGVIDK
EEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHCC
VEGQMLTIKVDGKTLVVALDNIRKGNIIAKF
CCCEEEEEEECCCEEEEEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA