| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is folP [H]
Identifier: 119774092
GI number: 119774092
Start: 1155159
End: 1155998
Strand: Direct
Name: folP [H]
Synonym: Sama_0955
Alternate gene names: 119774092
Gene position: 1155159-1155998 (Clockwise)
Preceding gene: 119774091
Following gene: 119774093
Centisome position: 26.83
GC content: 53.69
Gene sequence:
>840_bases GTGTTTACGCTAACTGCCAGAGAGAAAACCCTCGACCTGAGCCGCCCCGTGGTGATGGGGATTTTGAATGTGACTCCGGA TTCATTTTCCGACGGAGGCCAATTCGCCGCTTTTGAACGTGCCTGTGAACATGCTGACCAGTTGGTAACAGAAGGCGCGG CCATCATCGACATCGGTGGCGAGTCTACCCGCCCCGGCGCTGCCGAGGTATCGCTGGATGAAGAGATCAGCCGCGTCATC CCGCTGGTAGAGTATGTCAGCAAGACACATGATGTATGGGTGTCAGTGGATACCAGTAAAGCCGGAGTGATGAGTGAAGC CGCCAAGGCAGGTGCCCACTTAATCAATGATGTGCGTGCGCTGATGGAGCCGGGAGCGCTTGAAGCAGCCGCGGTTTCGG GATTAGCCGTATGCTTGATGCATATGCAGGGTCAGCCGCGCACCATGCAGCAAAATCCGGAATATGACAATTTAATAGAA GATGTATGCACGTTTTTTGAACATCGTATTGCTGCCTGTGTTGACGCGGGGATCCCACGGGCGCAGATTATCCTTGATCC CGGTTTTGGATTCGGTAAAACAGTTTCGCACAACTATGAGCTGCTCGCCCGATTTGCAGAGTTTGAGCGATTTGGTTTAC CGCTGCTGGCAGGCTTGTCCCGAAAGAGCATGCTTGGCAATTTGCTTGGCCGTGATGCAACTTCGCGTCTTGCTGGCAGT CTTGCTGGTGCCTTATTGTCGGCGCAGCAGGGCGCAAACATAATCAGGGTGCATGATGTCGCAGAGACGATAGATGTCCT CAAGGTGCTTGAGGCCACCCGGGAATATAAACACCTGTAA
Upstream 100 bases:
>100_bases CTGAACCCTGATGAACCTGTGATCAAACATTGATAGTGCTTAGCGATTGATGTTACTTAGAAAACCCCGAACCCGGGGTT TTCTTGTTTAAGGAGTATCC
Downstream 100 bases:
>100_bases TGATATTGGAGCAGGGACCAACAAACGCTCTTCAGTGAGTGTGGATGTGAATGGGGTAGAGAGTGTCACAACGTAAATTT TTTGGAACTGACGGGATCCG
Product: dihydropteroate synthase
Products: NA
Alternate protein names: DHPS; Dihydropteroate pyrophosphorylase [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MFTLTAREKTLDLSRPVVMGILNVTPDSFSDGGQFAAFERACEHADQLVTEGAAIIDIGGESTRPGAAEVSLDEEISRVI PLVEYVSKTHDVWVSVDTSKAGVMSEAAKAGAHLINDVRALMEPGALEAAAVSGLAVCLMHMQGQPRTMQQNPEYDNLIE DVCTFFEHRIAACVDAGIPRAQIILDPGFGFGKTVSHNYELLARFAEFERFGLPLLAGLSRKSMLGNLLGRDATSRLAGS LAGALLSAQQGANIIRVHDVAETIDVLKVLEATREYKHL
Sequences:
>Translated_279_residues MFTLTAREKTLDLSRPVVMGILNVTPDSFSDGGQFAAFERACEHADQLVTEGAAIIDIGGESTRPGAAEVSLDEEISRVI PLVEYVSKTHDVWVSVDTSKAGVMSEAAKAGAHLINDVRALMEPGALEAAAVSGLAVCLMHMQGQPRTMQQNPEYDNLIE DVCTFFEHRIAACVDAGIPRAQIILDPGFGFGKTVSHNYELLARFAEFERFGLPLLAGLSRKSMLGNLLGRDATSRLAGS LAGALLSAQQGANIIRVHDVAETIDVLKVLEATREYKHL >Mature_279_residues MFTLTAREKTLDLSRPVVMGILNVTPDSFSDGGQFAAFERACEHADQLVTEGAAIIDIGGESTRPGAAEVSLDEEISRVI PLVEYVSKTHDVWVSVDTSKAGVMSEAAKAGAHLINDVRALMEPGALEAAAVSGLAVCLMHMQGQPRTMQQNPEYDNLIE DVCTFFEHRIAACVDAGIPRAQIILDPGFGFGKTVSHNYELLARFAEFERFGLPLLAGLSRKSMLGNLLGRDATSRLAGS LAGALLSAQQGANIIRVHDVAETIDVLKVLEATREYKHL
Specific function: DHPS catalyzes the formation of the immediate precursor of folic acid. It is implicated in resistance to sulfonamide [H]
COG id: COG0294
COG function: function code H; Dihydropteroate synthase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 pterin-binding domain [H]
Homologues:
Organism=Escherichia coli, GI87082224, Length=276, Percent_Identity=59.7826086956522, Blast_Score=348, Evalue=2e-97, Organism=Saccharomyces cerevisiae, GI6324073, Length=337, Percent_Identity=28.486646884273, Blast_Score=128, Evalue=9e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006390 - InterPro: IPR011005 - InterPro: IPR000489 [H]
Pfam domain/function: PF00809 Pterin_bind [H]
EC number: =2.5.1.15 [H]
Molecular weight: Translated: 30005; Mature: 30005
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS50972 PTERIN_BINDING ; PS00792 DHPS_1 ; PS00793 DHPS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTLTAREKTLDLSRPVVMGILNVTPDSFSDGGQFAAFERACEHADQLVTEGAAIIDIGG CEEECCCHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECC ESTRPGAAEVSLDEEISRVIPLVEYVSKTHDVWVSVDTSKAGVMSEAAKAGAHLINDVRA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH LMEPGALEAAAVSGLAVCLMHMQGQPRTMQQNPEYDNLIEDVCTFFEHRIAACVDAGIPR HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC AQIILDPGFGFGKTVSHNYELLARFAEFERFGLPLLAGLSRKSMLGNLLGRDATSRLAGS EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCHHHHHHHH LAGALLSAQQGANIIRVHDVAETIDVLKVLEATREYKHL HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFTLTAREKTLDLSRPVVMGILNVTPDSFSDGGQFAAFERACEHADQLVTEGAAIIDIGG CEEECCCHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECC ESTRPGAAEVSLDEEISRVIPLVEYVSKTHDVWVSVDTSKAGVMSEAAKAGAHLINDVRA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH LMEPGALEAAAVSGLAVCLMHMQGQPRTMQQNPEYDNLIEDVCTFFEHRIAACVDAGIPR HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC AQIILDPGFGFGKTVSHNYELLARFAEFERFGLPLLAGLSRKSMLGNLLGRDATSRLAGS EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCHHHHHHHH LAGALLSAQQGANIIRVHDVAETIDVLKVLEATREYKHL HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]