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The map label for this gene is yaaA [C]

Identifier: 119774054

GI number: 119774054

Start: 1109937

End: 1110710

Strand: Direct

Name: yaaA [C]

Synonym: Sama_0917

Alternate gene names: 119774054

Gene position: 1109937-1110710 (Clockwise)

Preceding gene: 119774053

Following gene: 119774055

Centisome position: 25.78

GC content: 48.58

Gene sequence:

>774_bases
ATGCTGGTTGTAATTTCCCCCGCCAAAACATTGGATTATGATAATCCTGCGCCAACGAAACAGTACACATTACCTGAGCT
GGTGAGCCACAGCGCTGAGCTGATAGAAGTCTGTAAGGGCTTAACACCGGCAGATATCGCTTCTTTGATGTCTGTGAGTG
ACAAAATTGCTGGGCTGAATGCGGCAAGATTTGCATCTTGGACACCGTCCTTTTCATTGGAAAACGCCAAGCAGGCTCTC
TTTGCTTTTCGCGGGGATGTTTACACAGGATTGGACGCCGACACCCTAAGCCCGGAAGAGCTCGAGTATGCCCAGTCCCA
TCTGCGCATGCTTTCCGGTTTATATGGTGTGTTAAAACCGCTGGATTTGATGCAGGCCTACCGTCTTGAAATGGGTACAG
CCCTTGGCAATGGCCGTGGCAAAAACCTGTACGAGTTTTGGGGCAATCTCATTACGGATAAGCTGAACGAGGCGTTGTCG
GCTCAAGGGGATGATATTCTGGTCAATCTTGCGTCCAATGAATACTTCAAGGCCGTCAAAATCAAGGGGATTAAAGGGAC
ACTGGTGAACCCCGTGTTTAAGGATGCCAAAAACGGTCAGTATAAAATCATCAGTTTTTACGCCAAGAAAGCCCGTGGCT
TGATGGCACGTTTTATCCTGACCACCCGGACAAAGACCATAGAAGATCTGAAAAGGTTTGATTACGATGGCTACTACTAT
AGCCCTGAACAGTCGACTCCCTGCACGCCTGTGTTTTTACGGGAAGAGCGGTAA

Upstream 100 bases:

>100_bases
TGAGCCGATTAGTGCAATCCACAAAACCACGCCAATGCGGCGTGGTTTTTTTATCTCTCTTGGGTATCATAAGGCTTAAC
TGAATTGACGAGAGAAACCC

Downstream 100 bases:

>100_bases
AGTCCGCTGAGGGTGATAAAAACGCGGCCAATGGCCGCGTTTTTCATTGTCACTCTAAAACCACCTCCTATGGAGGTGGT
GATCGTTCTAGTGGGGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLVVISPAKTLDYDNPAPTKQYTLPELVSHSAELIEVCKGLTPADIASLMSVSDKIAGLNAARFASWTPSFSLENAKQAL
FAFRGDVYTGLDADTLSPEELEYAQSHLRMLSGLYGVLKPLDLMQAYRLEMGTALGNGRGKNLYEFWGNLITDKLNEALS
AQGDDILVNLASNEYFKAVKIKGIKGTLVNPVFKDAKNGQYKIISFYAKKARGLMARFILTTRTKTIEDLKRFDYDGYYY
SPEQSTPCTPVFLREER

Sequences:

>Translated_257_residues
MLVVISPAKTLDYDNPAPTKQYTLPELVSHSAELIEVCKGLTPADIASLMSVSDKIAGLNAARFASWTPSFSLENAKQAL
FAFRGDVYTGLDADTLSPEELEYAQSHLRMLSGLYGVLKPLDLMQAYRLEMGTALGNGRGKNLYEFWGNLITDKLNEALS
AQGDDILVNLASNEYFKAVKIKGIKGTLVNPVFKDAKNGQYKIISFYAKKARGLMARFILTTRTKTIEDLKRFDYDGYYY
SPEQSTPCTPVFLREER
>Mature_257_residues
MLVVISPAKTLDYDNPAPTKQYTLPELVSHSAELIEVCKGLTPADIASLMSVSDKIAGLNAARFASWTPSFSLENAKQAL
FAFRGDVYTGLDADTLSPEELEYAQSHLRMLSGLYGVLKPLDLMQAYRLEMGTALGNGRGKNLYEFWGNLITDKLNEALS
AQGDDILVNLASNEYFKAVKIKGIKGTLVNPVFKDAKNGQYKIISFYAKKARGLMARFILTTRTKTIEDLKRFDYDGYYY
SPEQSTPCTPVFLREER

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=257, Percent_Identity=58.7548638132296, Blast_Score=327, Evalue=5e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y917_SHEAM (A1S418)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_926794.1
- STRING:   A1S418
- GeneID:   4603169
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_0917
- NMPDR:   fig|326297.7.peg.864
- eggNOG:   COG3022
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- PhylomeDB:   A1S418
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 28638; Mature: 28638

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVISPAKTLDYDNPAPTKQYTLPELVSHSAELIEVCKGLTPADIASLMSVSDKIAGLN
CEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
AARFASWTPSFSLENAKQALFAFRGDVYTGLDADTLSPEELEYAQSHLRMLSGLYGVLKP
HHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LDLMQAYRLEMGTALGNGRGKNLYEFWGNLITDKLNEALSAQGDDILVNLASNEYFKAVK
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEE
IKGIKGTLVNPVFKDAKNGQYKIISFYAKKARGLMARFILTTRTKTIEDLKRFDYDGYYY
EECCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
SPEQSTPCTPVFLREER
CCCCCCCCCEEEEECCC
>Mature Secondary Structure
MLVVISPAKTLDYDNPAPTKQYTLPELVSHSAELIEVCKGLTPADIASLMSVSDKIAGLN
CEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
AARFASWTPSFSLENAKQALFAFRGDVYTGLDADTLSPEELEYAQSHLRMLSGLYGVLKP
HHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LDLMQAYRLEMGTALGNGRGKNLYEFWGNLITDKLNEALSAQGDDILVNLASNEYFKAVK
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEE
IKGIKGTLVNPVFKDAKNGQYKIISFYAKKARGLMARFILTTRTKTIEDLKRFDYDGYYY
EECCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
SPEQSTPCTPVFLREER
CCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA