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The map label for this gene is 119774037

Identifier: 119774037

GI number: 119774037

Start: 1089018

End: 1089686

Strand: Direct

Name: 119774037

Synonym: Sama_0900

Alternate gene names: NA

Gene position: 1089018-1089686 (Clockwise)

Preceding gene: 119774034

Following gene: 119774039

Centisome position: 25.29

GC content: 52.62

Gene sequence:

>669_bases
ATGACGCACGCCAAGGTGTGGGATTTGCCCATCAGGCTGTTTCATTGGTTGATGGTGACCTTGCTCGGATTGCTCTGGTG
GAGCGCCGAAACAGGCGAGATGCAATGGCATCAGGTGTTCGCCTATAGCCTGATGGCACTGCTGCTGTTCAGAGTGTTTT
GGGGCTTTGTTGGCAGTGATACCGCCCGCTTTGCGCACTTTCTGCATCATCCGCTGACCGTAGTGGAATACGCCAAAAAG
ACAGTCAGCAAAGGCGTGAAAGGCCACCATGGTCATAATCCTCTCGGCGGCTACATGGTATTGGCGCTGCTCTTGTGTCT
TGCTCTTCAGCTGATATCAGGCCTGTTTGCCACTGATGAAGTCTTTACCGAAGGGCCCCTGGTGAGCATGGTGAGCAGTG
ACACAGCCTCCTGGATGACCTGGCTGCACAAGCGCAATTTCGATTTGTTGTTAATCCTTGCCGCGGTACATGTATTGGCG
GTGGTGTGGCATCTACTCAAAGGCGACAAACTACTGGGAGCCATGGTGACGGGCCGCAGGCACCGTGATGACATTGAAGT
AAAATTAGATATCCGCTTTGCACCGCTGTGGAAAGCCGCAATTTTGTTGGTGCTCGTTGCCTTACCTATTGGCTATTTAT
TGCTGTGGCCAGCCATTCAGGCACTGTAA

Upstream 100 bases:

>100_bases
AACTCATCCCTGCTTACACTCATTTCCTTCTCTTTTCCCCTCAATTTGATTACCATCCCCATACTTTTTAAGGCTATTTC
CTGTGTATGCGGAGGATGTA

Downstream 100 bases:

>100_bases
CGGGTGATACTGAAATAATAAAAAAGCCTGCAGATGCAGGCTTTTTTATCAGACAACAGAAGCTTAGTCTTTTTTGTAGT
TGTCGTGGCAGCCTTTACAG

Product: b-type cytochrome

Products: NA

Alternate protein names: Cytochrome; B-Type Cytochrome; Hydrogenase Cytochrome B-Type Subunit; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Cytochrome B/B6 Domain; Hydrogenase Cytochrome B-Type; Hydrogenase Cytochrome B-Type Subunit Protein; Integral Membrane Protein; Cytochrome C Family Protein; Nickel-Dependent Hydrogenase; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTHAKVWDLPIRLFHWLMVTLLGLLWWSAETGEMQWHQVFAYSLMALLLFRVFWGFVGSDTARFAHFLHHPLTVVEYAKK
TVSKGVKGHHGHNPLGGYMVLALLLCLALQLISGLFATDEVFTEGPLVSMVSSDTASWMTWLHKRNFDLLLILAAVHVLA
VVWHLLKGDKLLGAMVTGRRHRDDIEVKLDIRFAPLWKAAILLVLVALPIGYLLLWPAIQAL

Sequences:

>Translated_222_residues
MTHAKVWDLPIRLFHWLMVTLLGLLWWSAETGEMQWHQVFAYSLMALLLFRVFWGFVGSDTARFAHFLHHPLTVVEYAKK
TVSKGVKGHHGHNPLGGYMVLALLLCLALQLISGLFATDEVFTEGPLVSMVSSDTASWMTWLHKRNFDLLLILAAVHVLA
VVWHLLKGDKLLGAMVTGRRHRDDIEVKLDIRFAPLWKAAILLVLVALPIGYLLLWPAIQAL
>Mature_221_residues
THAKVWDLPIRLFHWLMVTLLGLLWWSAETGEMQWHQVFAYSLMALLLFRVFWGFVGSDTARFAHFLHHPLTVVEYAKKT
VSKGVKGHHGHNPLGGYMVLALLLCLALQLISGLFATDEVFTEGPLVSMVSSDTASWMTWLHKRNFDLLLILAAVHVLAV
VWHLLKGDKLLGAMVTGRRHRDDIEVKLDIRFAPLWKAAILLVLVALPIGYLLLWPAIQAL

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25133; Mature: 25002

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHAKVWDLPIRLFHWLMVTLLGLLWWSAETGEMQWHQVFAYSLMALLLFRVFWGFVGSD
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TARFAHFLHHPLTVVEYAKKTVSKGVKGHHGHNPLGGYMVLALLLCLALQLISGLFATDE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VFTEGPLVSMVSSDTASWMTWLHKRNFDLLLILAAVHVLAVVWHLLKGDKLLGAMVTGRR
HHHCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
HRDDIEVKLDIRFAPLWKAAILLVLVALPIGYLLLWPAIQAL
CCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
THAKVWDLPIRLFHWLMVTLLGLLWWSAETGEMQWHQVFAYSLMALLLFRVFWGFVGSD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TARFAHFLHHPLTVVEYAKKTVSKGVKGHHGHNPLGGYMVLALLLCLALQLISGLFATDE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VFTEGPLVSMVSSDTASWMTWLHKRNFDLLLILAAVHVLAVVWHLLKGDKLLGAMVTGRR
HHHCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
HRDDIEVKLDIRFAPLWKAAILLVLVALPIGYLLLWPAIQAL
CCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA