Click here to switch to the map view.

The map label for this gene is rseC [C]

Identifier: 119774014

GI number: 119774014

Start: 1066319

End: 1066798

Strand: Direct

Name: rseC [C]

Synonym: Sama_0877

Alternate gene names: 119774014

Gene position: 1066319-1066798 (Clockwise)

Preceding gene: 119774013

Following gene: 119774015

Centisome position: 24.76

GC content: 58.13

Gene sequence:

>480_bases
ATGATGGAAGAGCTGGCCCGTGTCGTGCGGGTCGAAACCTCTGGCTGGGTGACGGTCGAAGTGGAAGTCAAAACGGCCTG
TGGACACTGCGCTGCCAGTGAAAACTGTGGCACGGGTGCCATCGCCAGCGCGTTTGCCGGTAAAACCCAGCAGTTCTCAA
TCAAAAGCGCCGAGACTTTTGAGAACGGTGAGCTTATTCGCCTCGGGCTGCCTGAATCAGCGCTGCTCAAAGCGGCGGCG
CTGGTGTATCTGCTCCCACTTGTCGGTTTACTGCTGGGGGCCTTGGGCGGCAAGATGGCAGGCTCAGTGTTAAGCTTTGG
CAGTGAAACTGCCAGTCTGGTGTTTTCGCTGCTGGGGGCCATAGTGGCCTGGCTCTGGGGTAAGCGGCTTGCCAAAAATC
TTGAGCGTCAAACTCAACCTGTCATCCTCGCCCGCCTGGGCAAAGCGCTGGAACCCTCTTGCCTGACTAAAGCAGTCTGA

Upstream 100 bases:

>100_bases
TCAGCGAAAAAGTGGGTAATGCCGAGGTGGTCGCGGTAGGGCGAGTACCCATGGCGACTTTGAGCCGCATTATCCGCAGT
TTGGCACTGGACAAGTCATC

Downstream 100 bases:

>100_bases
CTTTCCTGCGGATCAGATTGGTATTGCCCCCGTAATCGGGTACAATTTCGCACCTTTGATTTTGTCTTCCATTTTTAGTT
TGGTCATTACCGAAGAATGA

Product: sigma-E factor regulatory protein RseC

Products: NA

Alternate protein names: Sigma-E Factor Regulatory Protein RseC; Positive Regulator Of Sigma(E) RseC/MucC

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MMEELARVVRVETSGWVTVEVEVKTACGHCAASENCGTGAIASAFAGKTQQFSIKSAETFENGELIRLGLPESALLKAAA
LVYLLPLVGLLLGALGGKMAGSVLSFGSETASLVFSLLGAIVAWLWGKRLAKNLERQTQPVILARLGKALEPSCLTKAV

Sequences:

>Translated_159_residues
MMEELARVVRVETSGWVTVEVEVKTACGHCAASENCGTGAIASAFAGKTQQFSIKSAETFENGELIRLGLPESALLKAAA
LVYLLPLVGLLLGALGGKMAGSVLSFGSETASLVFSLLGAIVAWLWGKRLAKNLERQTQPVILARLGKALEPSCLTKAV
>Mature_159_residues
MMEELARVVRVETSGWVTVEVEVKTACGHCAASENCGTGAIASAFAGKTQQFSIKSAETFENGELIRLGLPESALLKAAA
LVYLLPLVGLLLGALGGKMAGSVLSFGSETASLVFSLLGAIVAWLWGKRLAKNLERQTQPVILARLGKALEPSCLTKAV

Specific function: Seems To Modulate The Activity Of Rpoe (Sigma-E). [C]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788923, Length=146, Percent_Identity=31.5068493150685, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16646; Mature: 16646

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEELARVVRVETSGWVTVEVEVKTACGHCAASENCGTGAIASAFAGKTQQFSIKSAETF
CHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCC
ENGELIRLGLPESALLKAAALVYLLPLVGLLLGALGGKMAGSVLSFGSETASLVFSLLGA
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHH
IVAWLWGKRLAKNLERQTQPVILARLGKALEPSCLTKAV
HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure
MMEELARVVRVETSGWVTVEVEVKTACGHCAASENCGTGAIASAFAGKTQQFSIKSAETF
CHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCC
ENGELIRLGLPESALLKAAALVYLLPLVGLLLGALGGKMAGSVLSFGSETASLVFSLLGA
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHH
IVAWLWGKRLAKNLERQTQPVILARLGKALEPSCLTKAV
HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA