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The map label for this gene is rseB [H]

Identifier: 119774013

GI number: 119774013

Start: 1065384

End: 1066322

Strand: Direct

Name: rseB [H]

Synonym: Sama_0876

Alternate gene names: 119774013

Gene position: 1065384-1066322 (Clockwise)

Preceding gene: 119774012

Following gene: 119774014

Centisome position: 24.74

GC content: 54.53

Gene sequence:

>939_bases
TTGCGATCCATTCTTCTGGCCCTCGTGGCCATGGTCCTGCCGGTATCTGCCCAGGACCTGTCTGCCAAGGCCTGGCTTGA
GGAAATGAGCCGGGCCCTCAATCAAGAACAGTTCAAAATGTCGGTCATTCATCTTCAGGCCGATCATATACGTCCTCTGG
TGTATCTCCATGGCAAGGTTAATGGTCAGGAAGTGGCCTTCCTTGAGCATCTCAACGGGCCGATAAAAAATGCGGTTCGC
ATCGATAACCGGGTGACCTTTATCGAGCACGACCAGCCGGCTTTTACAGTAAATGCCGACAGAATTCAGGGGTTGTGGCC
AGCGGTATTCGCCAATGACCCTGCTGGTATCGAGGCGGGCTACCAGTTTGTGCTCGGTGGCCGTAGCCGTATTGCCGGGC
GACCCGGGCAGTTGGTTCGTTTTATTCCCAATGATCCTCACCGTTATCCGCTACAGGTTTGGGTGGATATGGAAACCTAT
CTGCCACTGCGCTATGAGTTGCTGACCGACGAAAAAGAGTTGCTGGAGCAGATCATGGTGGTAGAACTATTGGTGCTCGA
AGAGCCTGCGCCGCTTTTGGTGGAGGCAGCCAAACAGGACTGGCCTCCTGTGATTAATCAACTGGACAGGCACGATGGTC
AAAACTGGACCTTCACCTGGTTGCCGGAAGGTTTCAAGGTGGTGGCGCGGGATCATCACAGATTGATGGGCTCACAGGAG
CCTGTGGAGTATGTCGCGATCACTGACGGCATCGCCAATATCTCTGTGTATGTTGGCCGTGCCGGTAATGTGCCCATGCC
TGATGAGCTTCTGACCCGCAATGGTCTCGGGCTTGTCAGCGAAAAAGTGGGTAATGCCGAGGTGGTCGCGGTAGGGCGAG
TACCCATGGCGACTTTGAGCCGCATTATCCGCAGTTTGGCACTGGACAAGTCATCATGA

Upstream 100 bases:

>100_bases
CTGCAAGATCATATGTTGCAGCAGAGATTGAACACCGGGGCGGTTGTGGACGACAATAGCGAGGTAACCCCAATTCCAGT
CAATCGCTGAAGGAGTTAGC

Downstream 100 bases:

>100_bases
TGGAAGAGCTGGCCCGTGTCGTGCGGGTCGAAACCTCTGGCTGGGTGACGGTCGAAGTGGAAGTCAAAACGGCCTGTGGA
CACTGCGCTGCCAGTGAAAA

Product: putative sigma E regulatory protein, MucB/RseB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRSILLALVAMVLPVSAQDLSAKAWLEEMSRALNQEQFKMSVIHLQADHIRPLVYLHGKVNGQEVAFLEHLNGPIKNAVR
IDNRVTFIEHDQPAFTVNADRIQGLWPAVFANDPAGIEAGYQFVLGGRSRIAGRPGQLVRFIPNDPHRYPLQVWVDMETY
LPLRYELLTDEKELLEQIMVVELLVLEEPAPLLVEAAKQDWPPVINQLDRHDGQNWTFTWLPEGFKVVARDHHRLMGSQE
PVEYVAITDGIANISVYVGRAGNVPMPDELLTRNGLGLVSEKVGNAEVVAVGRVPMATLSRIIRSLALDKSS

Sequences:

>Translated_312_residues
MRSILLALVAMVLPVSAQDLSAKAWLEEMSRALNQEQFKMSVIHLQADHIRPLVYLHGKVNGQEVAFLEHLNGPIKNAVR
IDNRVTFIEHDQPAFTVNADRIQGLWPAVFANDPAGIEAGYQFVLGGRSRIAGRPGQLVRFIPNDPHRYPLQVWVDMETY
LPLRYELLTDEKELLEQIMVVELLVLEEPAPLLVEAAKQDWPPVINQLDRHDGQNWTFTWLPEGFKVVARDHHRLMGSQE
PVEYVAITDGIANISVYVGRAGNVPMPDELLTRNGLGLVSEKVGNAEVVAVGRVPMATLSRIIRSLALDKSS
>Mature_312_residues
MRSILLALVAMVLPVSAQDLSAKAWLEEMSRALNQEQFKMSVIHLQADHIRPLVYLHGKVNGQEVAFLEHLNGPIKNAVR
IDNRVTFIEHDQPAFTVNADRIQGLWPAVFANDPAGIEAGYQFVLGGRSRIAGRPGQLVRFIPNDPHRYPLQVWVDMETY
LPLRYELLTDEKELLEQIMVVELLVLEEPAPLLVEAAKQDWPPVINQLDRHDGQNWTFTWLPEGFKVVARDHHRLMGSQE
PVEYVAITDGIANISVYVGRAGNVPMPDELLTRNGLGLVSEKVGNAEVVAVGRVPMATLSRIIRSLALDKSS

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=309, Percent_Identity=30.0970873786408, Blast_Score=141, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 34923; Mature: 34923

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSILLALVAMVLPVSAQDLSAKAWLEEMSRALNQEQFKMSVIHLQADHIRPLVYLHGKV
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHEEEEEEEECCCCCEEEEEECCC
NGQEVAFLEHLNGPIKNAVRIDNRVTFIEHDQPAFTVNADRIQGLWPAVFANDPAGIEAG
CCCEEHHHHHCCCCHHHHEEECCEEEEEECCCCEEEEEHHHHCCCCCCEECCCCCCCCCC
YQFVLGGRSRIAGRPGQLVRFIPNDPHRYPLQVWVDMETYLPLRYELLTDEKELLEQIMV
CEEEECCCHHCCCCCCCEEEECCCCCCCCCEEEEEEHHHCCCEEEEEECCHHHHHHHHHH
VELLVLEEPAPLLVEAAKQDWPPVINQLDRHDGQNWTFTWLPEGFKVVARDHHRLMGSQE
HHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCEEHHHHHHHHCCCCC
PVEYVAITDGIANISVYVGRAGNVPMPDELLTRNGLGLVSEKVGNAEVVAVGRVPMATLS
CEEEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCCCHHHHCCCCEEEEEECCCCHHHHH
RIIRSLALDKSS
HHHHHHHCCCCC
>Mature Secondary Structure
MRSILLALVAMVLPVSAQDLSAKAWLEEMSRALNQEQFKMSVIHLQADHIRPLVYLHGKV
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHEEEEEEEECCCCCEEEEEECCC
NGQEVAFLEHLNGPIKNAVRIDNRVTFIEHDQPAFTVNADRIQGLWPAVFANDPAGIEAG
CCCEEHHHHHCCCCHHHHEEECCEEEEEECCCCEEEEEHHHHCCCCCCEECCCCCCCCCC
YQFVLGGRSRIAGRPGQLVRFIPNDPHRYPLQVWVDMETYLPLRYELLTDEKELLEQIMV
CEEEECCCHHCCCCCCCEEEECCCCCCCCCEEEEEEHHHCCCEEEEEECCHHHHHHHHHH
VELLVLEEPAPLLVEAAKQDWPPVINQLDRHDGQNWTFTWLPEGFKVVARDHHRLMGSQE
HHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCEEHHHHHHHHCCCCC
PVEYVAITDGIANISVYVGRAGNVPMPDELLTRNGLGLVSEKVGNAEVVAVGRVPMATLS
CEEEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCCCHHHHCCCCEEEEEECCCCHHHHH
RIIRSLALDKSS
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]