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The map label for this gene is 119773844

Identifier: 119773844

GI number: 119773844

Start: 868003

End: 868899

Strand: Direct

Name: 119773844

Synonym: Sama_0706

Alternate gene names: NA

Gene position: 868003-868899 (Clockwise)

Preceding gene: 119773843

Following gene: 119773845

Centisome position: 20.16

GC content: 51.62

Gene sequence:

>897_bases
ATGCAGTCGAAACGCATAGACTTTAACTGGGTCTTGCTGGGGATAGCTTTGGTGCTGGGTAGCCTGGCGGCCTGGGCAAC
AAAGAACTATTTCATTGTTAAAGAACAGGAAATCCGGGCAGAGCTGTCAAACAGCAATGTAAAAATGGTGGATGTGGTGG
TCGCCACCCAGGAACTGCGTAAAGGCGACATCGTCGATGAAACCAATATGTCGGTTCGCTCTATCCGTGCCGATGTCATC
CCACTGGATGCGATTCGCCCATCCCAATTCAATGAAGTGGCAGGTCAGATGTTGCTGAGCGAAATGTCTCCTGGGCGGCC
GCTTATCAGTGCTTATCTACCCGGCTTCAAAACCAGGCAGTTTTCAGATCTGCTACAGGAAGGCCAGCGCGCCGTCACGA
TCGACATCAATGAAGAAAACTCGACGGCGGGCATGTTGGTGCCCTCGGATCTGGTGGATCTTTTCCTCAGCTACACAGTG
GAAAACGGTGACAGCGAAAGGGTCAAGATGGAGCTCTTGATTGAAAAGGCTCAGGTTTTGGCTACGGGCAAGCGCAGCAT
AGATGTACATCCCGAGCTGGTGAACTCCATTTACGACAACCCGGATTCTTACAACACAGTTACCCTGGCGCTGTCCACCG
AGGATGCGATTCGGGTCTCCCTTGCCAAAGGCCGTGGCAAATTTGTCACCTTGCTGCGCAACAAAGCCGAGTCCGCCCCC
GTTGCCGTGACCAATATGTTTGGCGATCAGATTTTTGGTATGTCCGGCGACAAAGGTAGCCATCAGGTTGAATACATCAC
AGGGGGAGGTGGACTCAAGAGCAGCTTCCAGGAATACCCCTTACCAAAAGAATTGATGGACGAATTAGCTCAGGGAAAAG
TTAACACCGCATTATGA

Upstream 100 bases:

>100_bases
GAAATTTGCAGGGATGCGTTGAAGACCTGGTACACGGCTTTTGCCCACGCAAAGTCTCAGCCGCCACTGCCGTTTTAAGT
CACATAAGGAAATCATTGAA

Downstream 100 bases:

>100_bases
AAACTATTAACCAACTGATGATTTTAGGCTGGGTACTTTGCTCAGTGATGCTTTCGGTCGCTTATGCTCATAACAATCAA
CCGCTTAAGCTTTATGTCGG

Product: Flp pilus assembly protein CpaB-like protein

Products: NA

Alternate protein names: SAF Domain-Containing Protein; Flp Pilus Assembly; Secretory Protein; Flp Pilus Assembly CpaB; CpaB Pilus Assembly Protein; Flp Pilus Assembly Protein; Flp Pilus Assembly Protein CpaB-Like Protein

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MQSKRIDFNWVLLGIALVLGSLAAWATKNYFIVKEQEIRAELSNSNVKMVDVVVATQELRKGDIVDETNMSVRSIRADVI
PLDAIRPSQFNEVAGQMLLSEMSPGRPLISAYLPGFKTRQFSDLLQEGQRAVTIDINEENSTAGMLVPSDLVDLFLSYTV
ENGDSERVKMELLIEKAQVLATGKRSIDVHPELVNSIYDNPDSYNTVTLALSTEDAIRVSLAKGRGKFVTLLRNKAESAP
VAVTNMFGDQIFGMSGDKGSHQVEYITGGGGLKSSFQEYPLPKELMDELAQGKVNTAL

Sequences:

>Translated_298_residues
MQSKRIDFNWVLLGIALVLGSLAAWATKNYFIVKEQEIRAELSNSNVKMVDVVVATQELRKGDIVDETNMSVRSIRADVI
PLDAIRPSQFNEVAGQMLLSEMSPGRPLISAYLPGFKTRQFSDLLQEGQRAVTIDINEENSTAGMLVPSDLVDLFLSYTV
ENGDSERVKMELLIEKAQVLATGKRSIDVHPELVNSIYDNPDSYNTVTLALSTEDAIRVSLAKGRGKFVTLLRNKAESAP
VAVTNMFGDQIFGMSGDKGSHQVEYITGGGGLKSSFQEYPLPKELMDELAQGKVNTAL
>Mature_298_residues
MQSKRIDFNWVLLGIALVLGSLAAWATKNYFIVKEQEIRAELSNSNVKMVDVVVATQELRKGDIVDETNMSVRSIRADVI
PLDAIRPSQFNEVAGQMLLSEMSPGRPLISAYLPGFKTRQFSDLLQEGQRAVTIDINEENSTAGMLVPSDLVDLFLSYTV
ENGDSERVKMELLIEKAQVLATGKRSIDVHPELVNSIYDNPDSYNTVTLALSTEDAIRVSLAKGRGKFVTLLRNKAESAP
VAVTNMFGDQIFGMSGDKGSHQVEYITGGGGLKSSFQEYPLPKELMDELAQGKVNTAL

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32734; Mature: 32734

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKRIDFNWVLLGIALVLGSLAAWATKNYFIVKEQEIRAELSNSNVKMVDVVVATQELR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCEEEEEEEEEHHHHH
KGDIVDETNMSVRSIRADVIPLDAIRPSQFNEVAGQMLLSEMSPGRPLISAYLPGFKTRQ
CCCCCCCCCCHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHH
FSDLLQEGQRAVTIDINEENSTAGMLVPSDLVDLFLSYTVENGDSERVKMELLIEKAQVL
HHHHHHCCCEEEEEEECCCCCCCCEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ATGKRSIDVHPELVNSIYDNPDSYNTVTLALSTEDAIRVSLAKGRGKFVTLLRNKAESAP
HCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCEEEEECCCCCCCC
VAVTNMFGDQIFGMSGDKGSHQVEYITGGGGLKSSFQEYPLPKELMDELAQGKVNTAL
EEEEECCCCCEECCCCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQSKRIDFNWVLLGIALVLGSLAAWATKNYFIVKEQEIRAELSNSNVKMVDVVVATQELR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCEEEEEEEEEHHHHH
KGDIVDETNMSVRSIRADVIPLDAIRPSQFNEVAGQMLLSEMSPGRPLISAYLPGFKTRQ
CCCCCCCCCCHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHH
FSDLLQEGQRAVTIDINEENSTAGMLVPSDLVDLFLSYTVENGDSERVKMELLIEKAQVL
HHHHHHCCCEEEEEEECCCCCCCCEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ATGKRSIDVHPELVNSIYDNPDSYNTVTLALSTEDAIRVSLAKGRGKFVTLLRNKAESAP
HCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCEEEEECCCCCCCC
VAVTNMFGDQIFGMSGDKGSHQVEYITGGGGLKSSFQEYPLPKELMDELAQGKVNTAL
EEEEECCCCCEECCCCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA