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The map label for this gene is mdtA [H]

Identifier: 119773812

GI number: 119773812

Start: 830358

End: 831434

Strand: Direct

Name: mdtA [H]

Synonym: Sama_0674

Alternate gene names: 119773812

Gene position: 830358-831434 (Clockwise)

Preceding gene: 119773811

Following gene: 119773813

Centisome position: 19.28

GC content: 54.04

Gene sequence:

>1077_bases
ATGACAAGAATGATACTGATGCCTCTGGGGCTGATTGTGCTGCTGGGGAGCTGTCGTCAGGCACCGGATATTGAACACAC
GCCTGCCAGAGTGGCGGTTTACACCATTCCCAGCACCGAAAACCAGGTTACAAGGGTATTCAGCGGAGTGGCCAGGGCGC
AGGATCTCACCGCCTTGGCATTTCGTGTTGAAGGCCGTATCGCCCGCATTCCGGTTACCAAGGGGCAAAGGGTTAAGGCC
GGAGATGTGTTGGCCGTGCTTGAAAAAAACGACTTTCAAATTGCCCTGAATGATCGTCGTGCTCGCCTGGACGTGACCCG
CAAGCAGGCCGAACGCTCCAAAACCCTGGTGGATCAACAATTGATGGCGCAGGCGGAGTACGATCAGATGAATGCGGAAT
ATCTGGTTGCCCGCGCCGAGGCCAGACAAGCTGAGCTGATGCTGGAATATACCAAACTCAAAGCTCCCTTCGACGGTTTG
ATTGGCGATGTATTTCTCAAGTCCTTTGAAAACGTTCAGCCCGGTACCCTGGTGCTCAGCGTCCATAGAACAGAGCGTAT
CGAAGTCGATGTGCAGGTGCCCGACCTGCTGATAGCTGTGTCGCGTCGCGCCGAAACCGGTCAACAAAAACAGGGCTTTG
ATGTGGCCTTTGAAGCCTTTCCAGACAAAAGCTTTATTGGCCACTTGCTGGAAGTAAACACTGAAAAAGATCCCCAATCC
CATACCTACGTTGCCACCGTCGCGGTTGAGTTACCCGAGGGGGTTAAGGTGCTCGAGGGGATGCCCGCCAAGGTCACTGT
GGATTTGGGCAAGGCTACCTATACCTACCGACGTGAATATCTGTTGCCAATCAGTGCCGTGGTGATGCGAGACGGCAGTG
ATATTGATTTGCAGGATGCCGGAGTGTGGCTTTACGACTCTGCCACTGGCACCGTTAAATTCAAGCCTGTGCGACTTGGC
GTGATTGTGGGCCAAAGTATTGAAGTCGTTGATGGCCTCGCCGATGGACAGCAGGTGGTGACTCAAGGGGCTTCACGCCT
CGTGGACGGCCAACAAGTTGAACTGATTCAGGGATAA

Upstream 100 bases:

>100_bases
CCGGGCTGAATGACGGCGACTTTGTCGTGGTGGCAGGCGCAGATGAACTCAAGGATGGCCAGAGCGCAGTGCGCTGGGTG
AAGGAGCGGGGGCTGTGAAC

Downstream 100 bases:

>100_bases
GGACAGACAATGAGCGTAGCAGGCTATTTCGTCAAAAACTCCGTCATCAGCTGGATGTTTACCCTGATCCTCTTGTTGGG
AGGCAGTGTTGCCTTTCTTG

Product: periplasmic linker protein

Products: NA

Alternate protein names: Multidrug transporter mdtA [H]

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MTRMILMPLGLIVLLGSCRQAPDIEHTPARVAVYTIPSTENQVTRVFSGVARAQDLTALAFRVEGRIARIPVTKGQRVKA
GDVLAVLEKNDFQIALNDRRARLDVTRKQAERSKTLVDQQLMAQAEYDQMNAEYLVARAEARQAELMLEYTKLKAPFDGL
IGDVFLKSFENVQPGTLVLSVHRTERIEVDVQVPDLLIAVSRRAETGQQKQGFDVAFEAFPDKSFIGHLLEVNTEKDPQS
HTYVATVAVELPEGVKVLEGMPAKVTVDLGKATYTYRREYLLPISAVVMRDGSDIDLQDAGVWLYDSATGTVKFKPVRLG
VIVGQSIEVVDGLADGQQVVTQGASRLVDGQQVELIQG

Sequences:

>Translated_358_residues
MTRMILMPLGLIVLLGSCRQAPDIEHTPARVAVYTIPSTENQVTRVFSGVARAQDLTALAFRVEGRIARIPVTKGQRVKA
GDVLAVLEKNDFQIALNDRRARLDVTRKQAERSKTLVDQQLMAQAEYDQMNAEYLVARAEARQAELMLEYTKLKAPFDGL
IGDVFLKSFENVQPGTLVLSVHRTERIEVDVQVPDLLIAVSRRAETGQQKQGFDVAFEAFPDKSFIGHLLEVNTEKDPQS
HTYVATVAVELPEGVKVLEGMPAKVTVDLGKATYTYRREYLLPISAVVMRDGSDIDLQDAGVWLYDSATGTVKFKPVRLG
VIVGQSIEVVDGLADGQQVVTQGASRLVDGQQVELIQG
>Mature_357_residues
TRMILMPLGLIVLLGSCRQAPDIEHTPARVAVYTIPSTENQVTRVFSGVARAQDLTALAFRVEGRIARIPVTKGQRVKAG
DVLAVLEKNDFQIALNDRRARLDVTRKQAERSKTLVDQQLMAQAEYDQMNAEYLVARAEARQAELMLEYTKLKAPFDGLI
GDVFLKSFENVQPGTLVLSVHRTERIEVDVQVPDLLIAVSRRAETGQQKQGFDVAFEAFPDKSFIGHLLEVNTEKDPQSH
TYVATVAVELPEGVKVLEGMPAKVTVDLGKATYTYRREYLLPISAVVMRDGSDIDLQDAGVWLYDSATGTVKFKPVRLGV
IVGQSIEVVDGLADGQQVVTQGASRLVDGQQVELIQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=343, Percent_Identity=24.7813411078717, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022824
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 39461; Mature: 39330

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRMILMPLGLIVLLGSCRQAPDIEHTPARVAVYTIPSTENQVTRVFSGVARAQDLTALA
CCEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEEE
FRVEGRIARIPVTKGQRVKAGDVLAVLEKNDFQIALNDRRARLDVTRKQAERSKTLVDQQ
EEECCEEEEEECCCCCEEECCCEEEEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHHH
LMAQAEYDQMNAEYLVARAEARQAELMLEYTKLKAPFDGLIGDVFLKSFENVQPGTLVLS
HHHHHHHHHCCCEEEEEEHHHHHHHHHEEHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEE
VHRTERIEVDVQVPDLLIAVSRRAETGQQKQGFDVAFEAFPDKSFIGHLLEVNTEKDPQS
EECCEEEEEEEECCCEEEEEHHCCCCCCCCCCCEEEEECCCCHHHHHHHEEECCCCCCCC
HTYVATVAVELPEGVKVLEGMPAKVTVDLGKATYTYRREYLLPISAVVMRDGSDIDLQDA
CEEEEEEEEECCCCHHHHCCCCCEEEEECCCCEEEEHHEEECCEEEEEEECCCCCCEECC
GVWLYDSATGTVKFKPVRLGVIVGQSIEVVDGLADGQQVVTQGASRLVDGQQVELIQG
CEEEEECCCCEEEEEEEEEEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure 
TRMILMPLGLIVLLGSCRQAPDIEHTPARVAVYTIPSTENQVTRVFSGVARAQDLTALA
CEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEEE
FRVEGRIARIPVTKGQRVKAGDVLAVLEKNDFQIALNDRRARLDVTRKQAERSKTLVDQQ
EEECCEEEEEECCCCCEEECCCEEEEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHHH
LMAQAEYDQMNAEYLVARAEARQAELMLEYTKLKAPFDGLIGDVFLKSFENVQPGTLVLS
HHHHHHHHHCCCEEEEEEHHHHHHHHHEEHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEE
VHRTERIEVDVQVPDLLIAVSRRAETGQQKQGFDVAFEAFPDKSFIGHLLEVNTEKDPQS
EECCEEEEEEEECCCEEEEEHHCCCCCCCCCCCEEEEECCCCHHHHHHHEEECCCCCCCC
HTYVATVAVELPEGVKVLEGMPAKVTVDLGKATYTYRREYLLPISAVVMRDGSDIDLQDA
CEEEEEEEEECCCCHHHHCCCCCEEEEECCCCEEEEHHEEECCEEEEEEECCCCCCEECC
GVWLYDSATGTVKFKPVRLGVIVGQSIEVVDGLADGQQVVTQGASRLVDGQQVELIQG
CEEEEECCCCEEEEEEEEEEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA