Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773729

Identifier: 119773729

GI number: 119773729

Start: 738742

End: 739443

Strand: Direct

Name: 119773729

Synonym: Sama_0591

Alternate gene names: NA

Gene position: 738742-739443 (Clockwise)

Preceding gene: 119773723

Following gene: 119773730

Centisome position: 17.16

GC content: 54.13

Gene sequence:

>702_bases
ATGTTTCTCGAGCCTTTTTTTACTCAAACTGATGAAACTGTAACGATTTCCCCTTTTCAGGCCAGCGAGTTTGCCAAGCG
GGTTGCAGAAGATTTCAACCCTATTCATGACGAAAGTGCCAAGCGCTTTTGTGTGCCCGGTGACCTTTTGTTTGCACTGG
TGCTGAGCCACTATGGCCTGAGCCAGAAGATGCAATTCAAGTTCGAAGGCATGGTAGGCGAGGGCGTGTGCCTGAACTTC
CCGGTCGAGGTGGGCGACAGCTTCCCAATCTGTGACAGCCGCGATAAGACTTACCTCAGCGTCAGCCGCCAGGGCGACGT
AAGCCGCTGCGAGACCCAAATCGAGTCTTTCGTGCGCAGCTATGTGTCTTTCTCAGGGCTTAACTTTATTCATGTGCTGG
TGCCCATGATGCGTGAGCACGGGGTCATGATTAACCCCGATCGTCCACTGGTGATCTACGAAAGTATGGCGTTCGATCTC
ACAACCCTGGATTTCGATCAGGTTGCACTCGAGCTCAGTGATGCGCGCCTCAGTGTGGATGGCAAGCGTGGTGACGTGAC
GCTGGAATTTGCCCTTATCAGCGATGGTAAGCAGGTTGGCACCGGCGTTAAGACCCTGGTGATGAGTGGCCTGCGAGCTC
TCGATGAAGCAGCCCTCGATGGTATGGCACAGTTCTACGAAGAGCGCCGCGCCACCCTGTAA

Upstream 100 bases:

>100_bases
CTTACTGGCGCAAGTCATCGGGTGAGTTAATTGTCATAATTGAGGTAGACTGCTTGGCCTAAAAAAACGACACAACAAGA
TTTCAGGTGTATCACTGCCT

Downstream 100 bases:

>100_bases
CGCACAGCTTGGCTTAAATTCCCGCCAAACAGTGCGCAAAGCCTGATATGGCGCCGCTTCAAGGCCCCGTGTGATTGCCA
TCCACGGGGCTTTCCTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MFLEPFFTQTDETVTISPFQASEFAKRVAEDFNPIHDESAKRFCVPGDLLFALVLSHYGLSQKMQFKFEGMVGEGVCLNF
PVEVGDSFPICDSRDKTYLSVSRQGDVSRCETQIESFVRSYVSFSGLNFIHVLVPMMREHGVMINPDRPLVIYESMAFDL
TTLDFDQVALELSDARLSVDGKRGDVTLEFALISDGKQVGTGVKTLVMSGLRALDEAALDGMAQFYEERRATL

Sequences:

>Translated_233_residues
MFLEPFFTQTDETVTISPFQASEFAKRVAEDFNPIHDESAKRFCVPGDLLFALVLSHYGLSQKMQFKFEGMVGEGVCLNF
PVEVGDSFPICDSRDKTYLSVSRQGDVSRCETQIESFVRSYVSFSGLNFIHVLVPMMREHGVMINPDRPLVIYESMAFDL
TTLDFDQVALELSDARLSVDGKRGDVTLEFALISDGKQVGTGVKTLVMSGLRALDEAALDGMAQFYEERRATL
>Mature_233_residues
MFLEPFFTQTDETVTISPFQASEFAKRVAEDFNPIHDESAKRFCVPGDLLFALVLSHYGLSQKMQFKFEGMVGEGVCLNF
PVEVGDSFPICDSRDKTYLSVSRQGDVSRCETQIESFVRSYVSFSGLNFIHVLVPMMREHGVMINPDRPLVIYESMAFDL
TTLDFDQVALELSDARLSVDGKRGDVTLEFALISDGKQVGTGVKTLVMSGLRALDEAALDGMAQFYEERRATL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26043; Mature: 26043

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLEPFFTQTDETVTISPFQASEFAKRVAEDFNPIHDESAKRFCVPGDLLFALVLSHYGL
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCC
SQKMQFKFEGMVGEGVCLNFPVEVGDSFPICDSRDKTYLSVSRQGDVSRCETQIESFVRS
CCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
YVSFSGLNFIHVLVPMMREHGVMINPDRPLVIYESMAFDLTTLDFDQVALELSDARLSVD
HHHHCCCHHHHHHHHHHHHCCEEECCCCCEEEEECCEEEEEECCHHHHHHEECCCEEEEC
GKRGDVTLEFALISDGKQVGTGVKTLVMSGLRALDEAALDGMAQFYEERRATL
CCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFLEPFFTQTDETVTISPFQASEFAKRVAEDFNPIHDESAKRFCVPGDLLFALVLSHYGL
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCC
SQKMQFKFEGMVGEGVCLNFPVEVGDSFPICDSRDKTYLSVSRQGDVSRCETQIESFVRS
CCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
YVSFSGLNFIHVLVPMMREHGVMINPDRPLVIYESMAFDLTTLDFDQVALELSDARLSVD
HHHHCCCHHHHHHHHHHHHCCEEECCCCCEEEEECCEEEEEECCHHHHHHEECCCEEEEC
GKRGDVTLEFALISDGKQVGTGVKTLVMSGLRALDEAALDGMAQFYEERRATL
CCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA