Click here to switch to the map view.

The map label for this gene is 119773620

Identifier: 119773620

GI number: 119773620

Start: 591059

End: 592219

Strand: Direct

Name: 119773620

Synonym: Sama_0480

Alternate gene names: NA

Gene position: 591059-592219 (Clockwise)

Preceding gene: 119773619

Following gene: 119773622

Centisome position: 13.73

GC content: 57.54

Gene sequence:

>1161_bases
ATGACGCTGCTTCGGCTTATCCTTGAAGAGCTCAAAGCCATAGTCGCCGATAAGGCGATTGCCGTTACTCTGTTTGGTGG
CGTGCTGTTTTATGCCTTGCTGTATCCCTTGCCCTATTTGAATCAGGTGCCCACCGAGCAGGCGCTGGTGGTGGTTGATC
TGGATAATACCAGTCTGAGCCGGGAGCTTATCCGCCATGCCGATGCCAGCCCGAAAATCCGGGTGGCAAGGGCCGCCGGC
AGTGTAGCCGAGGCGCAGCACTATATTGCCAGCGGCGACTTCCATGGTTTGCTGGTGATCCCTGCGGGTTTTAAACGTGA
CCTGCTGCTTGGTAAAGGGGCCACACTCAGCTATGGCGGTGACGCCAGTTACTTTTTGGTTTACTCGGCACTGGTGGAGG
GCTTGGTAACGGCCGGTATGGATGCTGCCAGGTCGGTACAGCTGCTGGGTATGCTCAGCCGGGGCGAATCTTTTGCCGGT
GCCAGCCTCAGTCTGTTGCCCATGCACCTGAATGCGGTGCCTGCCTATAACCCGGGCCTGGGTTACACCCCCTATGTGGT
ACCCGGCCTGTTCCTGCTGATTTTGCATCAGACGTTGCTGATTGGCACCGGGATACTGGGTGCTGGGCAATGGCGTAAAG
CGGGCTATTGGCAGCAGGTGTCGTCGCTGGAGTTGTTGATAGGTCGTATTGCGGCTTTTGGTCTCATCTATGCAGCCCTC
GGCGCCTTTTATATGGGGTGGTGCTATCACTGGTATGGGGTGAGTGTGCAGGCAGGGCTTGGGGATATCGCAGCCTTTAT
CGTGCCTTTCTATCTGGCGACCGCCGCGGCTGGTGTGGCCGCGAGCTGTCTTTTCCGCCGTCGCGATATGCCCACGCAGG
TGATGCTGCTGGCCTCCATGCCGATACTGTTTGTCAGCGGTTTTGTGTGGCCGCTTTCTCTCATTCCCGAGCCTCTGGTC
ATGGCAGCCCAGACCATTCCGGCGGTGCCTGCCATCTTTGGTATGCTCAAACTCAATCAGTTGGGGACAGGATTCGACGG
CGTCTTCTCTGAGTGGTTAACGCTTTGGCTGCTGGCACTGGTGTATCTGGCACTGGCATGGTGGGGCCTGGTTGTCAGGC
AGCGGGAAGTGAATCAACTGAGTCCCCCAAAACAGGGGTAA

Upstream 100 bases:

>100_bases
GCATGGAGTTACTGGGTAAGAGTTTCACTTTTATGCCGTTTCTGCTGCTTCTGTTGCCCATTGCGCTGCTGGCACGCAAG
GGGCTTAAGGAGGCGCAGTC

Downstream 100 bases:

>100_bases
GAAAACGCCCCGCATTGCGGGGCGCTAATCTGTCTGACGGCGTGGCAGTCTTCAGGACTCGGGAGTATTGTCCCGCAAGT
ACTTGAGGAGCTCCTTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transport System Permease Protein; ABC-Type Multidrug Transport System Protein; Permease Component Of ABC Transporter; ABC-2 Type Transport System Permease; Integral Membrane Protein; Multidrug ABC Transporter Permease Component; ABC-2 Type Transporter Domain Protein; Conserved Transporter; ABC Transporter Permease; Multidrug ABC Transporter Permease Protein; ABC Transporter Transmembrane Protein; Antibiotic Transport System Permease Protein

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTLLRLILEELKAIVADKAIAVTLFGGVLFYALLYPLPYLNQVPTEQALVVVDLDNTSLSRELIRHADASPKIRVARAAG
SVAEAQHYIASGDFHGLLVIPAGFKRDLLLGKGATLSYGGDASYFLVYSALVEGLVTAGMDAARSVQLLGMLSRGESFAG
ASLSLLPMHLNAVPAYNPGLGYTPYVVPGLFLLILHQTLLIGTGILGAGQWRKAGYWQQVSSLELLIGRIAAFGLIYAAL
GAFYMGWCYHWYGVSVQAGLGDIAAFIVPFYLATAAAGVAASCLFRRRDMPTQVMLLASMPILFVSGFVWPLSLIPEPLV
MAAQTIPAVPAIFGMLKLNQLGTGFDGVFSEWLTLWLLALVYLALAWWGLVVRQREVNQLSPPKQG

Sequences:

>Translated_386_residues
MTLLRLILEELKAIVADKAIAVTLFGGVLFYALLYPLPYLNQVPTEQALVVVDLDNTSLSRELIRHADASPKIRVARAAG
SVAEAQHYIASGDFHGLLVIPAGFKRDLLLGKGATLSYGGDASYFLVYSALVEGLVTAGMDAARSVQLLGMLSRGESFAG
ASLSLLPMHLNAVPAYNPGLGYTPYVVPGLFLLILHQTLLIGTGILGAGQWRKAGYWQQVSSLELLIGRIAAFGLIYAAL
GAFYMGWCYHWYGVSVQAGLGDIAAFIVPFYLATAAAGVAASCLFRRRDMPTQVMLLASMPILFVSGFVWPLSLIPEPLV
MAAQTIPAVPAIFGMLKLNQLGTGFDGVFSEWLTLWLLALVYLALAWWGLVVRQREVNQLSPPKQG
>Mature_385_residues
TLLRLILEELKAIVADKAIAVTLFGGVLFYALLYPLPYLNQVPTEQALVVVDLDNTSLSRELIRHADASPKIRVARAAGS
VAEAQHYIASGDFHGLLVIPAGFKRDLLLGKGATLSYGGDASYFLVYSALVEGLVTAGMDAARSVQLLGMLSRGESFAGA
SLSLLPMHLNAVPAYNPGLGYTPYVVPGLFLLILHQTLLIGTGILGAGQWRKAGYWQQVSSLELLIGRIAAFGLIYAALG
AFYMGWCYHWYGVSVQAGLGDIAAFIVPFYLATAAAGVAASCLFRRRDMPTQVMLLASMPILFVSGFVWPLSLIPEPLVM
AAQTIPAVPAIFGMLKLNQLGTGFDGVFSEWLTLWLLALVYLALAWWGLVVRQREVNQLSPPKQG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41575; Mature: 41443

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLRLILEELKAIVADKAIAVTLFGGVLFYALLYPLPYLNQVPTEQALVVVDLDNTSLS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHH
RELIRHADASPKIRVARAAGSVAEAQHYIASGDFHGLLVIPAGFKRDLLLGKGATLSYGG
HHHHHHCCCCCCEEEEHHHCCHHHHHHHHHCCCCCEEEEECCCCCCCCEECCCCEEECCC
DASYFLVYSALVEGLVTAGMDAARSVQLLGMLSRGESFAGASLSLLPMHLNAVPAYNPGL
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCC
GYTPYVVPGLFLLILHQTLLIGTGILGAGQWRKAGYWQQVSSLELLIGRIAAFGLIYAAL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GAFYMGWCYHWYGVSVQAGLGDIAAFIVPFYLATAAAGVAASCLFRRRDMPTQVMLLASM
HHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
PILFVSGFVWPLSLIPEPLVMAAQTIPAVPAIFGMLKLNQLGTGFDGVFSEWLTLWLLAL
HHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VYLALAWWGLVVRQREVNQLSPPKQG
HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TLLRLILEELKAIVADKAIAVTLFGGVLFYALLYPLPYLNQVPTEQALVVVDLDNTSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHH
RELIRHADASPKIRVARAAGSVAEAQHYIASGDFHGLLVIPAGFKRDLLLGKGATLSYGG
HHHHHHCCCCCCEEEEHHHCCHHHHHHHHHCCCCCEEEEECCCCCCCCEECCCCEEECCC
DASYFLVYSALVEGLVTAGMDAARSVQLLGMLSRGESFAGASLSLLPMHLNAVPAYNPGL
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCC
GYTPYVVPGLFLLILHQTLLIGTGILGAGQWRKAGYWQQVSSLELLIGRIAAFGLIYAAL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GAFYMGWCYHWYGVSVQAGLGDIAAFIVPFYLATAAAGVAASCLFRRRDMPTQVMLLASM
HHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
PILFVSGFVWPLSLIPEPLVMAAQTIPAVPAIFGMLKLNQLGTGFDGVFSEWLTLWLLAL
HHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VYLALAWWGLVVRQREVNQLSPPKQG
HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA